Fitness for 5 genes in Rhodopseudomonas palustris CGA009

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500 ntTX73_017900 and TX73_017905 are separated by 27 nucleotidesTX73_017905 and TX73_017910 are separated by 120 nucleotidesTX73_017910 and TX73_017915 are separated by 55 nucleotidesTX73_017915 and TX73_017920 overlap by 4 nucleotides TX73_017900: TX73_017900 - TAXI family TRAP transporter solute-binding subunit, at 3,900,692 to 3,901,852 _017900 TX73_017905: TX73_017905 - TRAP transporter permease, at 3,901,880 to 3,903,946 _017905 TX73_017910: TX73_017910 - hypothetical protein, at 3,904,067 to 3,904,621 _017910 TX73_017915: TX73_017915 - OB-fold domain-containing protein, at 3,904,677 to 3,905,042 _017915 TX73_017920: TX73_017920 - thiolase family protein, at 3,905,039 to 3,906,175 _017920
Group Condition TX73_017900 TX73_017905 TX73_017910 TX73_017915 TX73_017920
carbon source 4-Hydroxybenzoate (C) +0.2 -0.0 -0.7 -0.1 +0.0
carbon source L-Malic (C); anaerobic -0.2 +0.1 -0.5 +0.2 -0.0
survival starvation expt 2; 3 days; outgrowth in CAAc +0.2 -0.0 -0.6 +0.2 -0.0
carbon source Butyric Acid (C); anaerobic +0.0 -0.1 -0.4 +0.2 +0.1
survival starvation expt 1; 14 days; outgrowth in CAAc +0.1 -0.0 -0.5 +0.1 +0.1
carbon source Pimelic (C); anaerobic +0.1 +0.1 -0.4 +0.3 -0.2
stress L-Lactate (C) with 10 mM Sodium Chloride -0.2 -0.1 +0.8 +0.3 -0.6
carbon source Azelaic (C); anaerobic -0.1 +0.0 -0.2 +0.4 +0.1
survival starvation expt 3; 7 days; outgrowth in CAAc +0.1 +0.1 -0.4 +0.6 -0.1
carbon source acetate trihydrate and Sodium L-Lactate (C) +0.4 -0.0 +0.6 -0.5 -0.1
survival outgrowth control starvation outgrowth control in CAAc +0.3 +0.0 -0.3 +0.3 +0.1
carbon source PM with Formate and Sodium bicarbonate anaerobic with light -0.0 +0.1 +0.3 -0.0 +0.4
carbon source dark aerobic PM with butyrate aerobic in dark -0.1 +0.1 +0.5 -0.0 +0.3
stress L-Lactate (C) with 10 mM Sodium Chloride -0.2 -0.0 +0.9 +0.2 -0.1
carbon source PM with argon and bicarbonate 20 mM and Sodium thiosulfate 50 mM -0.1 +0.1 +0.4 +0.3 +0.1
sulfur source sodium isethionate sulfur source -0.2 +0.0 +0.7 +0.2 +0.1
stress PM_argon75_N2O25 butyrate and Chloride 0.1 mM +0.2 -0.0 +0.6 +0.0 +0.1
carbon source MDC_bicarb with butyrate +0.0 +0.1 +0.2 +0.5 +0.2
carbon source PM with argon and bicarbonate 20 mM and Sodium thiosulfate 50 mM -0.1 +0.2 +0.3 +0.5 +0.1
carbon source dark aerobic PM with succinate and Sodium Formate aerobic in dark +0.3 +0.2 +0.4 -0.1 +0.1
sulfur source NFM with pyruvate +0.2 +0.1 +1.2 -0.4 -0.2
sulfur source Dimethylsulfoniopropionate sulfur source +0.3 +0.1 +0.1 +0.4 +0.0
carbon source PM with succinate and Sodium Formate anaerobic with light +0.2 +0.1 +0.0 +0.2 +0.4
carbon source PM with argon and bicarbonate 60 mM and Sodium thiosulfate 30 mM +0.1 +0.0 +0.3 +0.3 +0.3
carbon source acetate trihydrate and Sodium L-Lactate (C) +0.3 -0.0 +0.8 +0.3 -0.3
carbon source acetate trihydrate and Sodium L-Lactate (C) +0.1 -0.0 +0.4 +0.6 +0.1
carbon source PM with argon and bicarbonate 60 mM and Sodium thiosulfate 30 mM +0.2 +0.2 +0.1 +0.4 +0.3
sulfur source NFM with pyruvate -0.1 -0.0 +0.8 +0.3 +0.2
carbon source MDC_bicarb with butyrate and Adenine +0.2 +0.2 +0.1 +0.4 +0.3
carbon source dark aerobic PM with butyrate aerobic in dark +0.2 +0.1 +0.6 +0.5 +0.1
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