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Protein
Homologs
Fitness for 5 genes in
Rhodopseudomonas palustris CGA009
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
TX73_017890 and TX73_017895 are separated by 279 nucleotides
TX73_017895 and TX73_017900 are separated by 183 nucleotides
TX73_017900 and TX73_017905 are separated by 27 nucleotides
TX73_017905 and TX73_017910 are separated by 120 nucleotides
TX73_017890: TX73_017890 - IclR family transcriptional regulator, at 3,899,042 to 3,900,007
_017890
TX73_017895: TX73_017895 - acetyl-CoA carboxylase biotin carboxyl carrier protein subunit, at 3,900,287 to 3,900,508
_017895
TX73_017900: TX73_017900 - TAXI family TRAP transporter solute-binding subunit, at 3,900,692 to 3,901,852
_017900
TX73_017905: TX73_017905 - TRAP transporter permease, at 3,901,880 to 3,903,946
_017905
TX73_017910: TX73_017910 - hypothetical protein, at 3,904,067 to 3,904,621
_017910
Group
Condition
TX73
_017890
TX73
_017895
TX73
_017900
TX73
_017905
TX73
_017910
carbon source
L-Malic (C); anaerobic
+0.1
-1.1
-0.2
+0.1
-0.5
carbon source
Azelaic (C); anaerobic
-0.1
-1.3
-0.1
+0.1
-0.2
carbon source dark aerobic
PM with butyrate aerobic in dark
-0.3
-1.3
-0.1
+0.1
+0.5
carbon source
L-Leucine (C); anaerobic
+0.1
-1.0
-0.1
-0.0
+0.0
carbon source
Pimelic (C); anaerobic
+0.1
-0.5
+0.1
+0.1
-0.4
stress
Benzoate (C), sodium fluoride stress
+0.1
-0.8
+0.1
-0.0
+0.1
carbon source
MDC_bicarb with butyrate and Adenine
+0.2
-1.3
+0.2
+0.2
+0.1
carbon source
Fumarate (C); anaerobic
+0.2
-0.7
-0.0
+0.1
-0.1
coculture
dpurH coculture with Glucose and NaCl and NH4Cl
-0.0
-0.7
+0.1
+0.0
+0.2
carbon source
Pimelic (C); anaerobic
+0.2
-0.5
+0.0
+0.1
-0.3
carbon source dark aerobic
PM with succinate and Sodium Formate aerobic in dark
-0.2
-0.5
+0.2
+0.1
-0.1
carbon source
acetate trihydrate and Sodium L-Lactate (C)
-0.2
-0.6
+0.1
-0.0
+0.4
carbon source
4-Hydroxybenzoate (C)
-0.4
+0.6
+0.2
-0.0
-0.7
sulfur source
Thiamine HCl sulfur source
+0.1
-0.6
-0.0
+0.0
+0.3
sulfur source
NFM with pyruvate
-0.2
-0.6
-0.1
-0.0
+0.8
carbon source
aspen wood chips that have been decomposed by a fungus (C)
-0.3
-0.3
+0.2
+0.1
+0.2
carbon source
PM with argon and bicarbonate 60 mM and Sodium thiosulfate 30 mM
+0.1
-0.5
+0.2
+0.2
+0.1
sulfur source
sodium isethionate sulfur source
+0.3
-0.6
-0.2
+0.0
+0.7
stress
PM_argon75_N2O25 butyrate and Chloride 0.1 mM
-0.1
-0.4
+0.2
-0.0
+0.6
carbon source
acetate trihydrate and Sodium L-Lactate (C)
-0.0
-0.6
+0.4
-0.0
+0.6
sulfur source
NFM_No_Mo with acetate trihydrate
-0.3
+0.8
+0.0
+0.1
-0.2
stress
L-Lactate (C) with 10 mM Sodium Chloride
+0.1
-0.2
-0.2
-0.1
+0.8
stress
L-Lactate (C) with 10 mM Sodium Chloride
+0.1
-0.2
-0.1
-0.0
+0.7
carbon source dark aerobic
PM with butyrate aerobic in dark
+0.1
-0.3
+0.2
+0.1
+0.6
stress
L-Lactate (C) with 10 mM Sodium Chloride
-0.2
+0.2
-0.2
-0.0
+0.9
carbon source
acetate trihydrate and Sodium L-Lactate (C)
+0.1
-0.4
+0.3
-0.0
+0.8
carbon source dark aerobic
PM with succinate and Sodium Formate aerobic in dark
-0.1
+0.2
+0.3
+0.2
+0.4
carbon source
Citraconic (C); anaerobic
+0.3
+0.7
-0.1
+0.1
+0.0
sulfur source control
sulfur source control
+0.2
+0.2
+0.3
-0.0
+0.4
sulfur source
NFM with pyruvate
-0.1
+0.2
+0.2
+0.1
+1.2
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TX73_017900
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