Fitness for 5 genes in Rhodopseudomonas palustris CGA009

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500 ntTX73_017665 and TX73_017670 are separated by 237 nucleotidesTX73_017670 and TX73_017675 are separated by 484 nucleotidesTX73_017675 and TX73_017680 overlap by 31 nucleotidesTX73_017680 and TX73_017685 are separated by 445 nucleotides TX73_017665: TX73_017665 - CBS domain-containing protein, at 3,859,339 to 3,859,767 _017665 TX73_017670: TX73_017670 - rhomboid family intramembrane serine protease, at 3,860,005 to 3,860,775 _017670 TX73_017675: TX73_017675 - PAS domain-containing protein, at 3,861,260 to 3,861,829 _017675 TX73_017680: TX73_017680 - Crp/Fnr family transcriptional regulator, at 3,861,799 to 3,862,563 _017680 TX73_017685: TX73_017685 - PilZ domain-containing protein, at 3,863,009 to 3,863,614 _017685
Group Condition TX73_017665 TX73_017670 TX73_017675 TX73_017680 TX73_017685
carbon source 4-Hydroxybenzoate (C) -0.1 -0.2 +0.1 -0.6 +0.0
survival starvation expt 2; 3 days; outgrowth in CAAc +0.0 -0.2 -0.5 +0.2 -0.1
survival starvation expt 3; 7 days; outgrowth in CAAc -0.1 -0.1 -0.5 +0.3 +0.0
survival starvation expt 2; 14 days; outgrowth in CAAc +0.2 -0.2 -0.4 +0.1 +0.0
survival starvation expt 1; 7 days; outgrowth in CAAc +0.1 -0.0 -0.5 +0.2 +0.0
survival starvation expt 1; 3 days; outgrowth in CAAc +0.1 -0.1 -0.4 +0.2 -0.1
survival starvation expt 1; 14 days; outgrowth in CAAc -0.0 -0.2 -0.4 +0.3 +0.1
carbon source dark aerobic PM with succinate aerobic in dark +0.0 +0.1 +0.2 -0.1 -0.4
survival starvation expt 3; 3 days; outgrowth in CAAc +0.1 -0.1 -0.5 +0.1 +0.1
survival starvation expt 4; 7 days; outgrowth in CAAc +0.1 -0.1 -0.4 +0.3 +0.1
survival outgrowth control starvation outgrowth control in CAAc +0.2 -0.0 -0.4 +0.1 +0.1
survival starvation expt 3; 14 days; outgrowth in CAAc +0.2 -0.1 -0.6 +0.3 +0.1
carbon source 4-Aminobutyric (C); anaerobic +0.1 -0.2 +0.3 -0.1 -0.1
survival starvation expt 4; 3 days; outgrowth in CAAc +0.1 -0.2 -0.2 +0.2 +0.1
carbon source dark aerobic PM with succinate aerobic in dark +0.2 +0.1 +0.0 +0.1 -0.3
carbon source PM with argon and butyrate 10 mM and Sodium bicarbonate 10 mM +0.2 +0.1 -0.1 +0.1 -0.2
survival starvation expt 4; 14 days; outgrowth in CAAc +0.1 +0.1 -0.3 +0.3 +0.0
carbon source dark aerobic PM with succinate aerobic in dark +0.3 +0.1 +0.1 +0.1 -0.3
stress PM_argon75_N2O25 butyrate and Chloride 0.1 mM +0.2 -0.0 -0.4 +0.2 +0.2
stress L-Lactate (C) with 10 mM Sodium Chloride +0.7 +0.0 -0.4 +0.1 -0.1
carbon source Fumarate (C); anaerobic +0.2 -0.0 +0.3 +0.2 -0.1
sulfur source NFM with pyruvate +0.4 +0.1 +0.3 -0.1 -0.2
carbon source Citraconic (C); anaerobic +0.3 -0.1 +0.2 +0.1 +0.1
carbon source acetate trihydrate and Sodium L-Lactate (C) +0.5 +0.3 +0.1 -0.0 -0.1
carbon source acetate trihydrate and Sodium L-Lactate (C) +0.5 -0.0 +0.3 -0.1 +0.1
carbon source dark aerobic PM with succinate and Sodium Formate aerobic in dark +0.2 +0.4 +0.1 +0.3 +0.0
carbon source PM with Formate and Sodium bicarbonate anaerobic with light +0.1 +0.2 +0.0 +0.3 +0.4
carbon source PM with Formate and Sodium bicarbonate anaerobic with light +0.3 +0.2 +0.1 +0.3 +0.2
sulfur source NFM with pyruvate +0.5 +0.1 +0.7 -0.2 +0.0
carbon source PM with Formate and Sodium bicarbonate anaerobic with light +0.2 +0.3 +0.3 +0.4 +0.1
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