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Protein
Homologs
Fitness for 5 genes in
Rhodopseudomonas palustris CGA009
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
TX73_017600 and TX73_017605 are separated by 361 nucleotides
TX73_017605 and TX73_017610 are separated by 222 nucleotides
TX73_017610 and TX73_017615 are separated by 281 nucleotides
TX73_017615 and TX73_017620 are separated by 282 nucleotides
TX73_017600: TX73_017600 - class I SAM-dependent methyltransferase, at 3,841,744 to 3,842,394
_017600
TX73_017605: TX73_017605 - MFS transporter, at 3,842,756 to 3,843,874
_017605
TX73_017610: TX73_017610 - threonine--tRNA ligase, at 3,844,097 to 3,846,160
_017610
TX73_017615: TX73_017615 - hypothetical protein, at 3,846,442 to 3,847,020
_017615
TX73_017620: TX73_017620 - nitroreductase, at 3,847,303 to 3,847,866
_017620
Group
Condition
TX73
_017600
TX73
_017605
TX73
_017610
TX73
_017615
TX73
_017620
sulfur source
NFM with pyruvate
-0.6
+0.2
N.D.
-0.3
-0.3
carbon source
Butyric Acid (C); anaerobic
-0.3
+0.1
N.D.
-0.2
-0.0
stress
L-Lactate (C) with 10 mM Sodium Chloride
+0.3
-0.0
N.D.
-0.5
-0.2
carbon source
acetate trihydrate and Sodium L-Lactate (C)
-0.4
+0.1
N.D.
-0.3
+0.3
carbon source dark aerobic
PM with succinate and Sodium Formate aerobic in dark
+0.3
+0.1
N.D.
+0.2
-0.9
carbon source dark aerobic
PM with succinate and Sodium Formate aerobic in dark
+0.1
+0.2
N.D.
-0.0
-0.5
sulfur source
NFM_No_Mo_Plus_VCl3 with acetate trihydrate
+0.1
+0.2
N.D.
-0.2
-0.3
carbon source
Citraconic (C); anaerobic
+0.1
-0.1
N.D.
+0.1
-0.2
sulfur source
Sulfoacetic sulfur source
+0.0
-0.1
N.D.
-0.2
+0.2
sulfur source
NFM with pyruvate
+0.2
-0.2
N.D.
-0.3
+0.2
carbon source dark aerobic
PM with succinate aerobic in dark
+0.2
+0.1
N.D.
-0.1
-0.3
carbon source
MDC_bicarb with butyrate and Adenine
+0.2
-0.2
N.D.
+0.2
-0.2
stress
PM_argon75_N2O25 butyrate and Chloride 0.1 mM
-0.1
+0.1
N.D.
+0.2
-0.2
stress
PM_N2O butyrate and nitrate 0.1 mM
-0.3
-0.0
N.D.
+0.1
+0.3
stress
L-Lactate (C) with 10 mM Sodium Chloride
-0.1
+0.1
N.D.
-0.2
+0.3
sulfur source
sodium isethionate sulfur source
+0.4
+0.0
N.D.
+0.0
-0.2
survival
starvation expt 2; 14 days; outgrowth in CAAc
+0.2
+0.1
N.D.
-0.2
+0.1
survival
starvation expt 3; 14 days; outgrowth in CAAc
-0.2
+0.2
N.D.
-0.0
+0.3
stress
PM_argon75_N2O25 with buyrate and 0.1 mM Chloride; in dark
-0.1
+0.2
N.D.
-0.1
+0.3
sulfur source
NFM with succinate
+0.3
+0.2
N.D.
-0.2
+0.2
carbon source
4-Hydroxybenzoate (C)
-0.1
+0.1
N.D.
+0.2
+0.4
carbon source
PM with succinate anaerobic with light
+0.3
-0.1
N.D.
+0.2
+0.1
carbon source
PM with Formate and Sodium bicarbonate anaerobic with light
+0.1
-0.1
N.D.
+0.3
+0.2
carbon source
MDC_bicarb with butyrate and Adenine
+0.2
-0.0
N.D.
+0.3
+0.2
carbon source dark aerobic
PM with butyrate aerobic in dark
+0.4
+0.1
N.D.
+0.2
-0.0
sulfur source
Thiamine HCl sulfur source
+0.2
-0.0
N.D.
+0.3
+0.2
sulfur source control
Dimethyl sulfide sulfur source
+0.0
-0.0
N.D.
+0.3
+0.3
carbon source
PM with succinate and Sodium Formate anaerobic with light
+0.4
+0.2
N.D.
-0.1
+0.2
carbon source
PM with Formate and Sodium bicarbonate anaerobic with light
+0.0
+0.1
N.D.
+0.3
+0.3
carbon source
MDC_bicarb with butyrate and Adenine
+0.3
+0.3
N.D.
+0.1
+0.1
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