Fitness for 5 genes in Rhodopseudomonas palustris CGA009

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500 ntTX73_017600 and TX73_017605 are separated by 361 nucleotidesTX73_017605 and TX73_017610 are separated by 222 nucleotidesTX73_017610 and TX73_017615 are separated by 281 nucleotidesTX73_017615 and TX73_017620 are separated by 282 nucleotides TX73_017600: TX73_017600 - class I SAM-dependent methyltransferase, at 3,841,744 to 3,842,394 _017600 TX73_017605: TX73_017605 - MFS transporter, at 3,842,756 to 3,843,874 _017605 TX73_017610: TX73_017610 - threonine--tRNA ligase, at 3,844,097 to 3,846,160 _017610 TX73_017615: TX73_017615 - hypothetical protein, at 3,846,442 to 3,847,020 _017615 TX73_017620: TX73_017620 - nitroreductase, at 3,847,303 to 3,847,866 _017620
Group Condition TX73_017600 TX73_017605 TX73_017610 TX73_017615 TX73_017620
sulfur source NFM with pyruvate -0.6 +0.2 N.D. -0.3 -0.3
carbon source Butyric Acid (C); anaerobic -0.3 +0.1 N.D. -0.2 -0.0
stress L-Lactate (C) with 10 mM Sodium Chloride +0.3 -0.0 N.D. -0.5 -0.2
carbon source acetate trihydrate and Sodium L-Lactate (C) -0.4 +0.1 N.D. -0.3 +0.3
carbon source dark aerobic PM with succinate and Sodium Formate aerobic in dark +0.3 +0.1 N.D. +0.2 -0.9
carbon source dark aerobic PM with succinate and Sodium Formate aerobic in dark +0.1 +0.2 N.D. -0.0 -0.5
sulfur source NFM_No_Mo_Plus_VCl3 with acetate trihydrate +0.1 +0.2 N.D. -0.2 -0.3
carbon source Citraconic (C); anaerobic +0.1 -0.1 N.D. +0.1 -0.2
sulfur source Sulfoacetic sulfur source +0.0 -0.1 N.D. -0.2 +0.2
sulfur source NFM with pyruvate +0.2 -0.2 N.D. -0.3 +0.2
carbon source dark aerobic PM with succinate aerobic in dark +0.2 +0.1 N.D. -0.1 -0.3
carbon source MDC_bicarb with butyrate and Adenine +0.2 -0.2 N.D. +0.2 -0.2
stress PM_argon75_N2O25 butyrate and Chloride 0.1 mM -0.1 +0.1 N.D. +0.2 -0.2
stress PM_N2O butyrate and nitrate 0.1 mM -0.3 -0.0 N.D. +0.1 +0.3
stress L-Lactate (C) with 10 mM Sodium Chloride -0.1 +0.1 N.D. -0.2 +0.3
sulfur source sodium isethionate sulfur source +0.4 +0.0 N.D. +0.0 -0.2
survival starvation expt 2; 14 days; outgrowth in CAAc +0.2 +0.1 N.D. -0.2 +0.1
survival starvation expt 3; 14 days; outgrowth in CAAc -0.2 +0.2 N.D. -0.0 +0.3
stress PM_argon75_N2O25 with buyrate and 0.1 mM Chloride; in dark -0.1 +0.2 N.D. -0.1 +0.3
sulfur source NFM with succinate +0.3 +0.2 N.D. -0.2 +0.2
carbon source 4-Hydroxybenzoate (C) -0.1 +0.1 N.D. +0.2 +0.4
carbon source PM with succinate anaerobic with light +0.3 -0.1 N.D. +0.2 +0.1
carbon source PM with Formate and Sodium bicarbonate anaerobic with light +0.1 -0.1 N.D. +0.3 +0.2
carbon source MDC_bicarb with butyrate and Adenine +0.2 -0.0 N.D. +0.3 +0.2
carbon source dark aerobic PM with butyrate aerobic in dark +0.4 +0.1 N.D. +0.2 -0.0
sulfur source Thiamine HCl sulfur source +0.2 -0.0 N.D. +0.3 +0.2
sulfur source control Dimethyl sulfide sulfur source +0.0 -0.0 N.D. +0.3 +0.3
carbon source PM with succinate and Sodium Formate anaerobic with light +0.4 +0.2 N.D. -0.1 +0.2
carbon source PM with Formate and Sodium bicarbonate anaerobic with light +0.0 +0.1 N.D. +0.3 +0.3
carbon source MDC_bicarb with butyrate and Adenine +0.3 +0.3 N.D. +0.1 +0.1
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