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Protein
Homologs
Fitness for 5 genes in
Rhodopseudomonas palustris CGA009
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
TX73_017360 and TX73_017365 overlap by 4 nucleotides
TX73_017365 and TX73_017370 are separated by 762 nucleotides
TX73_017370 and TX73_017375 are separated by 228 nucleotides
TX73_017375 and TX73_017380 are separated by 512 nucleotides
TX73_017360: TX73_017360 - O-antigen ligase family protein, at 3,801,815 to 3,803,248
_017360
TX73_017365: TX73_017365 - polysaccharide export protein, at 3,803,245 to 3,804,453
_017365
TX73_017370: TX73_017370 - hypothetical protein, at 3,805,216 to 3,805,467
_017370
TX73_017375: TX73_017375 - hypothetical protein, at 3,805,696 to 3,805,977
_017375
TX73_017380: TX73_017380 - hypothetical protein, at 3,806,490 to 3,806,957
_017380
Group
Condition
TX73
_017360
TX73
_017365
TX73
_017370
TX73
_017375
TX73
_017380
carbon source
PM with argon and bicarbonate 20 mM and Sodium thiosulfate 50 mM
+0.1
+0.0
-1.0
-0.2
-0.1
carbon source
PM with argon and bicarbonate 60 mM and Sodium thiosulfate 30 mM
+0.1
-0.1
-0.7
-0.2
-0.0
stress
PM_N2O with buyrate and 0.1 mM bicarb and 0.1 mM nitrate; in dark
-0.1
-0.1
-0.4
-0.2
-0.1
stress
PM_N2O butyrate and nitrate 0.1 mM
-0.1
-0.2
-0.3
-0.2
-0.1
carbon source
MDC_bicarb with butyrate and Adenine
+0.1
-0.1
-0.6
-0.4
+0.1
stress
L-Lactate (C) with 10 mM Sodium Chloride
+0.2
-0.2
-0.2
-0.8
+0.2
sulfur source
Dimethylsulfoniopropionate sulfur source
+0.0
-0.1
-0.1
-0.5
-0.1
carbon source dark aerobic
PM with succinate aerobic in dark
+0.1
-0.1
-0.3
-0.3
+0.0
sulfur source
Thiamine HCl sulfur source
-0.0
-0.0
-0.6
+0.0
+0.1
carbon source
PM with argon and bicarbonate 60 mM and Sodium thiosulfate 30 mM
-0.1
-0.1
-0.4
+0.2
-0.1
carbon source
PM with argon and bicarbonate 20 mM and Sodium thiosulfate 50 mM
+0.0
+0.0
-0.7
+0.1
-0.0
carbon source
PM with argon and bicarbonate 20 mM and Sodium thiosulfate 50 mM
-0.0
-0.1
-0.8
+0.3
+0.2
carbon source
PM with argon and bicarbonate 20 mM and Sodium thiosulfate 50 mM
-0.0
-0.1
-0.7
+0.2
+0.1
carbon source
PM with argon and bicarbonate 60 mM and Sodium thiosulfate 30 mM
+0.0
-0.0
-0.7
+0.2
+0.1
sulfur source
NFM with pyruvate
+0.1
-0.0
+0.4
-1.2
+0.2
stress
PM_N2O with buyrate and 0.1 mM bicarb and 0.1 mM nitrate; in dark
-0.0
-0.0
-0.6
+0.1
+0.1
carbon source
L-Leucine (C); anaerobic
+0.1
-0.1
-0.3
-0.2
+0.1
carbon source
4-Hydroxybenzoate (C)
+0.0
+0.1
-0.4
-0.2
+0.1
carbon source
MDC_bicarb with butyrate and Adenine
-0.1
-0.1
-0.4
+0.0
+0.3
carbon source
Butyric Acid (C); anaerobic
+0.2
+0.1
+0.2
-0.5
-0.2
stress
L-Lactate (C) with 10 mM Sodium Chloride
+0.1
-0.3
-0.3
+0.1
+0.2
carbon source
PM with argon and butyrate 10 mM and Sodium bicarbonate 10 mM
+0.0
-0.1
-0.4
+0.2
+0.2
carbon source
Pimelic (C); anaerobic
+0.2
+0.1
-0.2
-0.3
+0.1
carbon source
aspen wood chips that have been decomposed by a fungus (C)
+0.0
-0.1
-0.3
+0.3
+0.1
sulfur source
Thiamine HCl sulfur source
+0.0
-0.0
-0.4
+0.2
+0.2
survival
starvation expt 2; 14 days; outgrowth in CAAc
-0.1
+0.0
+0.2
-0.5
+0.2
carbon source
MDC_bicarb with butyrate
-0.0
+0.1
-0.5
+0.1
+0.2
sulfur source control
sulfur source control
-0.0
-0.1
-0.3
+0.3
+0.2
sulfur source
Thiamine HCl sulfur source
+0.1
+0.0
-0.6
+0.3
+0.3
carbon source
aspen wood chips that have been decomposed by a fungus (C)
-0.0
-0.1
+0.2
-0.1
+0.4
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TX73_017370
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