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Protein
Homologs
Fitness for 5 genes in
Rhodopseudomonas palustris CGA009
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
TX73_017220 and TX73_017225 are separated by 143 nucleotides
TX73_017225 and TX73_017230 are separated by 252 nucleotides
TX73_017230 and TX73_017235 are separated by 134 nucleotides
TX73_017235 and TX73_017240 are separated by 175 nucleotides
TX73_017220: TX73_017220 - curli assembly protein CsgF, at 3,759,665 to 3,759,949
_017220
TX73_017225: TX73_017225 - CsgG/HfaB family protein, at 3,760,093 to 3,760,881
_017225
TX73_017230: TX73_017230 - hypothetical protein, at 3,761,134 to 3,761,523
_017230
TX73_017235: TX73_017235 - curlin repeat-containing protein, at 3,761,658 to 3,761,999
_017235
TX73_017240: TX73_017240 - hypothetical protein, at 3,762,175 to 3,762,360
_017240
Group
Condition
TX73
_017220
TX73
_017225
TX73
_017230
TX73
_017235
TX73
_017240
carbon source
acetate trihydrate and Sodium L-Lactate (C)
-1.2
-0.1
-0.0
-0.0
-0.2
carbon source
MDC_bicarb with butyrate and Adenine
-0.3
-0.4
-0.1
-0.2
-0.0
carbon source
Citraconic (C); anaerobic
-0.5
-0.3
-0.1
-0.0
-0.0
carbon source dark aerobic
PM with butyrate aerobic in dark
-0.7
-0.2
-0.1
+0.1
-0.1
sulfur source
sodium isethionate sulfur source
-1.0
+0.1
+0.1
+0.2
-0.1
stress
L-Lactate (C) with 10 mM Sodium Chloride
-0.1
-0.8
+0.3
+0.2
-0.3
carbon source
PM with succinate anaerobic with light
-0.1
-0.5
-0.2
+0.1
-0.1
stress
PM_argon75_N2O25 with buyrate and 0.1 mM Chloride; in dark
+0.4
-0.2
-0.2
-0.3
-0.2
sulfur source
Dimethylsulfoniopropionate sulfur source
-0.2
-0.3
+0.1
-0.2
+0.2
carbon source
MDC_bicarb with butyrate
+0.3
-0.3
-0.2
-0.0
-0.2
carbon source
MDC_bicarb with butyrate and Adenine
-0.1
-0.1
-0.0
-0.4
+0.3
carbon source
Pimelic (C); anaerobic
+0.3
-0.3
-0.2
-0.2
+0.1
stress
L-Lactate (C) with 10 mM Sodium Chloride
+0.2
-0.6
+0.4
+0.4
-0.7
carbon source
acetate trihydrate and Sodium L-Lactate (C)
+0.1
-0.5
+0.3
-0.0
-0.2
carbon source
4-Hydroxybenzoate (C)
-0.4
-0.0
+0.1
-0.2
+0.2
carbon source
MDC_bicarb with butyrate and Adenine
-0.3
-0.4
+0.0
+0.1
+0.2
carbon source
acetate trihydrate and Sodium L-Lactate (C)
-0.5
-0.4
+0.5
+0.1
-0.0
sulfur source
NFM with pyruvate
+0.2
+0.1
-0.8
+0.5
-0.2
sulfur source
2-(Methylthio)ethanol sulfur source
-0.6
+0.2
+0.2
-0.1
+0.2
survival
starvation expt 3; 14 days; outgrowth in CAAc
+0.4
+0.1
-0.2
-0.2
-0.1
stress
L-Lactate (C) with 10 mM Sodium Chloride
-0.1
-0.3
+0.5
+0.2
-0.3
survival
starvation expt 2; 14 days; outgrowth in CAAc
+0.6
-0.1
-0.2
-0.1
-0.1
carbon source
aspen wood chips that have been decomposed by a fungus (C)
+0.6
-0.2
+0.0
+0.1
-0.3
sulfur source control
sulfur source control
-0.4
+0.2
+0.0
+0.3
+0.1
carbon source
Azelaic (C); anaerobic
+0.5
+0.0
-0.1
-0.2
+0.1
survival
starvation expt 3; 7 days; outgrowth in CAAc
+0.5
+0.2
+0.0
-0.0
-0.2
sulfur source
Thiamine HCl sulfur source
+0.3
+0.2
+0.2
+0.2
-0.1
sulfur source control
sulfur source control
+0.3
+0.2
-0.1
+0.2
+0.2
sulfur source
Thiamine HCl sulfur source
+0.4
+0.2
+0.2
-0.0
+0.2
sulfur source
NFM_No_Mo_Plus_VCl3 with acetate trihydrate
+0.3
+0.2
+0.3
+0.0
+0.2
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TX73_017230
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