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Protein
Homologs
Fitness for 5 genes in
Rhodopseudomonas palustris CGA009
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
TX73_017185 and TX73_017190 are separated by 819 nucleotides
TX73_017190 and TX73_017195 are separated by 523 nucleotides
TX73_017195 and TX73_017200 are separated by 605 nucleotides
TX73_017200 and TX73_017205 are separated by 378 nucleotides
TX73_017185: TX73_017185 - TIGR04325 family methyltransferase, at 3,751,978 to 3,752,847
_017185
TX73_017190: TX73_017190 - hypothetical protein, at 3,753,667 to 3,754,149
_017190
TX73_017195: TX73_017195 - hypothetical protein, at 3,754,673 to 3,755,023
_017195
TX73_017200: TX73_017200 - helix-turn-helix transcriptional regulator, at 3,755,629 to 3,756,045
_017200
TX73_017205: TX73_017205 - curlin, at 3,756,424 to 3,758,175
_017205
Group
Condition
TX73
_017185
TX73
_017190
TX73
_017195
TX73
_017200
TX73
_017205
carbon source dark aerobic
PM with succinate aerobic in dark
-0.2
-1.2
+0.1
+0.2
-0.1
stress
L-Lactate (C) with 10 mM Sodium Chloride
-0.2
-0.7
+0.7
-0.8
+0.0
carbon source dark aerobic
PM with succinate aerobic in dark
+0.2
-1.1
-0.1
+0.0
+0.0
carbon source
PM with argon and bicarbonate 60 mM and Sodium thiosulfate 30 mM
+0.2
-0.7
-0.1
-0.2
-0.1
carbon source dark aerobic
PM with succinate aerobic in dark
-0.2
-0.9
-0.1
+0.3
+0.0
carbon source
PM with argon and bicarbonate 20 mM and Sodium thiosulfate 50 mM
-0.0
-0.7
-0.1
+0.1
-0.1
carbon source dark aerobic
PM with succinate aerobic in dark
+0.1
-0.9
+0.2
-0.0
-0.1
sulfur source
NFM_No_Mo_Plus_VCl3 with acetate trihydrate
-0.0
-0.7
-0.3
+0.1
+0.2
carbon source dark aerobic
PM with succinate aerobic in dark
-0.0
-0.8
+0.1
+0.2
-0.1
sulfur source
Thiamine HCl sulfur source
-0.1
-0.9
+0.1
+0.1
+0.2
sulfur source
Thiamine HCl sulfur source
+0.2
-1.0
+0.1
-0.0
+0.1
carbon source
Citraconic (C); anaerobic
-0.3
-0.4
+0.3
-0.0
-0.0
sulfur source
Thiamine HCl sulfur source
+0.2
-0.7
+0.1
-0.1
+0.1
carbon source dark aerobic
PM with butyrate aerobic in dark
+0.2
-0.6
+0.1
+0.0
-0.1
carbon source dark aerobic
PM with succinate aerobic in dark
+0.1
-0.8
+0.3
+0.2
-0.1
carbon source
acetate trihydrate and Sodium L-Lactate (C)
-0.3
-0.7
+0.8
-0.2
+0.1
stress
L-Lactate (C) with 10 mM Sodium Chloride
+0.0
-0.9
+0.9
-0.3
+0.0
carbon source
acetate trihydrate and Sodium L-Lactate (C)
-0.0
-0.6
+0.5
-0.2
+0.0
sulfur source
Thiamine HCl sulfur source
+0.3
-0.9
+0.2
+0.1
+0.1
carbon source
MDC_bicarb with butyrate and Adenine
+0.4
-0.2
+0.1
-0.2
-0.2
stress
L-Lactate (C) with 10 mM Sodium Chloride
+0.0
-1.0
+0.8
+0.0
+0.0
coculture
dpurH coculture with Glucose and NaCl and NH4Cl
+0.4
-0.6
+0.1
-0.0
+0.1
sulfur source
Dimethylsulfoniopropionate sulfur source
-0.6
+0.7
-0.2
-0.0
+0.0
coculture
dpurH coculture with Glucose and NaCl and NH4Cl
+0.3
-0.7
+0.4
+0.1
+0.1
sulfur source
NFM_No_Mo with acetate trihydrate
+0.2
-0.3
-0.2
+0.2
+0.1
carbon source
acetate trihydrate and Sodium L-Lactate (C)
+0.2
-0.3
+0.7
-0.2
-0.2
sulfur source
Taurine sulfur source
+0.3
-0.4
+0.3
+0.1
-0.1
carbon source
MDC_bicarb with butyrate
+0.5
-0.4
+0.1
+0.1
-0.0
carbon source
PM with succinate anaerobic with light
+0.4
-0.4
+0.3
+0.1
+0.1
sulfur source
NFM with pyruvate
-0.1
+0.2
+0.9
+0.2
+0.0
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