Fitness for 5 genes in Rhodopseudomonas palustris CGA009

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500 ntTX73_016935 and TX73_016940 overlap by 4 nucleotidesTX73_016940 and TX73_016945 are separated by 14 nucleotidesTX73_016945 and TX73_016950 overlap by 4 nucleotidesTX73_016950 and TX73_016955 are separated by 104 nucleotides TX73_016935: TX73_016935 - energy transducer TonB, at 3,692,922 to 3,693,770 _016935 TX73_016940: TX73_016940 - biopolymer transporter ExbD, at 3,693,767 to 3,694,216 _016940 TX73_016945: TX73_016945 - tonB-system energizer ExbB, at 3,694,231 to 3,695,166 _016945 TX73_016950: TX73_016950 - biliverdin-producing heme oxygenase, at 3,695,163 to 3,695,846 _016950 TX73_016955: TX73_016955 - TonB-dependent receptor, at 3,695,951 to 3,699,457 _016955
Group Condition TX73_016935 TX73_016940 TX73_016945 TX73_016950 TX73_016955
carbon source 4-Hydroxybenzoate (C) -0.1 -1.3 -0.2 +0.4 +0.0
sulfur source sodium isethionate sulfur source -0.3 -0.5 -0.2 -0.1 +0.0
stress PM_argon75_N2O25 butyrate and Chloride 0.1 mM +0.0 -1.1 +0.0 +0.1 -0.1
carbon source PM with argon and butyrate 10 mM and Sodium bicarbonate 10 mM -0.0 -0.9 -0.1 +0.1 -0.0
coculture dpurH coculture with Glucose and NaCl and NH4Cl -0.0 -0.9 -0.0 +0.1 -0.0
carbon source dark aerobic PM with butyrate aerobic in dark -0.2 -0.6 -0.2 +0.3 +0.0
sulfur source control sulfur source control -0.1 -0.8 +0.1 +0.3 +0.1
sulfur source NFM with pyruvate +0.2 -0.8 -0.1 +0.1 +0.1
carbon source dark aerobic PM with succinate and Sodium Formate aerobic in dark -0.0 -0.7 -0.1 +0.4 +0.0
carbon source Azelaic (C); anaerobic +0.1 -0.7 +0.0 +0.0 +0.1
sulfur source ethyl methyl sulfide sulfur source -0.1 -0.4 -0.1 +0.2 +0.1
carbon source MDC_bicarb with butyrate and Adenine -0.1 -0.6 +0.2 +0.1 +0.1
carbon source Pimelic (C); anaerobic +0.0 -0.6 -0.0 +0.3 +0.0
sulfur source NFM_No_Mo with acetate trihydrate +0.2 -0.8 +0.1 +0.3 +0.0
carbon source PM with argon and bicarbonate 60 mM and Sodium thiosulfate 30 mM -0.1 -0.6 -0.0 +0.5 +0.0
carbon source dark aerobic PM with succinate aerobic in dark -0.2 +0.5 +0.1 -0.2 -0.1
carbon source acetate trihydrate and Sodium L-Lactate (C) -0.2 +0.1 -0.2 +0.5 -0.1
stress PM_argon75_N2O25 butyrate and Chloride 0.1 mM -0.0 -0.3 -0.1 +0.6 -0.0
sulfur source Dimethylsulfoniopropionate sulfur source -0.1 +0.3 -0.1 +0.2 -0.1
carbon source acetate trihydrate and Sodium L-Lactate (C) +0.0 -0.4 -0.1 +0.7 +0.0
carbon source acetate trihydrate and Sodium L-Lactate (C) -0.0 +0.5 -0.4 +0.4 -0.2
sulfur source Sulfoacetic sulfur source +0.0 +0.6 +0.1 -0.2 -0.1
stress L-Lactate (C) with 10 mM Sodium Chloride +0.1 +0.4 -0.2 +0.1 +0.1
sulfur source control Dimethyl sulfide sulfur source -0.2 +0.6 -0.0 +0.1 +0.1
carbon source MDC_bicarb with butyrate and Adenine +0.1 +0.6 -0.0 +0.1 +0.0
carbon source aspen wood chips that have been decomposed by a fungus (C) +0.1 +0.5 -0.1 +0.2 +0.1
carbon source Citraconic (C); anaerobic -0.1 +0.5 +0.2 +0.3 +0.1
survival starvation expt 4; 3 days; outgrowth in CAAc +0.1 +0.3 +0.4 +0.2 +0.1
stress L-Lactate (C) with 10 mM Sodium Chloride -0.1 +0.3 -0.1 +1.0 +0.1
survival outgrowth control starvation outgrowth control in CAAc +0.1 +0.7 +0.2 +0.1 +0.1
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