Private Fitness
Home
Find Gene
BLAST
Experiments
Organisms
Help
Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodopseudomonas palustris CGA009
Add gene:
Go
Number of genes on each side:
1
2
3
4
5
Go
Top 30 experiments (either direction), sorted by average fitness
Or view
all 175 experiments
or
choose conditions
or try the
comparative fitness browser
500 nt
TX73_016335 and TX73_016340 are separated by 6 nucleotides
TX73_016340 and TX73_016345 are separated by 74 nucleotides
TX73_016345 and TX73_016350 are separated by 54 nucleotides
TX73_016350 and TX73_016355 are separated by 53 nucleotides
TX73_016335: TX73_016335 - DUF3253 domain-containing protein, at 3,567,269 to 3,567,553
_016335
TX73_016340: TX73_016340 - YdcF family protein, at 3,567,560 to 3,568,354
_016340
TX73_016345: TX73_016345 - aldo/keto reductase, at 3,568,429 to 3,569,262
_016345
TX73_016350: TX73_016350 - helix-turn-helix domain-containing protein, at 3,569,317 to 3,569,673
_016350
TX73_016355: TX73_016355 - magnesium transporter, at 3,569,727 to 3,571,148
_016355
Group
Condition
TX73
_016335
TX73
_016340
TX73
_016345
TX73
_016350
TX73
_016355
stress
PM_N2O with buyrate and 0.1 mM bicarb and 0.1 mM nitrate; in dark
-0.2
+0.1
-0.6
+0.0
-0.0
carbon source
MDC_bicarb with butyrate and Adenine
-0.1
-0.1
-0.4
-0.0
-0.0
sulfur source control
sulfur source control
-0.8
+0.1
+0.1
-0.1
-0.1
survival
starvation expt 3; 3 days; outgrowth in CAAc
-0.4
-0.2
+0.1
-0.2
-0.0
survival outgrowth control
starvation outgrowth control in CAAc
-0.3
-0.2
-0.1
-0.1
-0.1
survival
starvation expt 2; 14 days; outgrowth in CAAc
-0.1
-0.3
+0.0
-0.2
-0.1
survival
starvation expt 4; 14 days; outgrowth in CAAc
-0.1
-0.3
+0.0
-0.1
-0.1
stress
PM_N2O with buyrate and 0.1 mM bicarb and 0.1 mM nitrate; in dark
-0.2
+0.0
-0.5
+0.0
+0.1
survival
starvation expt 4; 3 days; outgrowth in CAAc
-0.3
-0.1
-0.2
+0.0
-0.0
carbon source dark aerobic
PM with succinate and Sodium Formate aerobic in dark
-0.1
+0.1
-0.8
+0.2
-0.0
carbon source
acetate trihydrate and Sodium L-Lactate (C)
-0.6
+0.3
-0.0
-0.1
-0.1
carbon source
PM with argon and bicarbonate 60 mM and Sodium thiosulfate 30 mM
-0.3
+0.1
-0.2
-0.0
-0.1
carbon source
acetate trihydrate and Sodium L-Lactate (C)
+0.2
-0.0
-0.2
-0.4
-0.1
carbon source dark aerobic
PM with succinate and Sodium Formate aerobic in dark
+0.2
-0.1
-0.8
+0.2
+0.0
stress
PM_N2O with buyrate and 0.1 mM bicarb and 0.1 mM nitrate; in dark
-0.2
+0.0
-0.5
+0.2
+0.1
stress
PM_N2O with buyrate and 0.1 mM bicarb and 0.1 mM nitrate; in dark
+0.1
+0.1
-0.6
+0.1
+0.0
carbon source
PM with argon and bicarbonate 60 mM and Sodium thiosulfate 30 mM
-0.3
+0.3
-0.1
-0.2
-0.0
stress
L-Lactate (C) with 10 mM Sodium Chloride
+0.4
+0.2
-0.5
-0.2
-0.3
carbon source dark aerobic
PM with succinate aerobic in dark
+0.1
-0.2
-0.3
+0.1
+0.1
carbon source dark aerobic
PM with butyrate aerobic in dark
-0.4
+0.3
-0.1
+0.2
-0.0
stress
L-Lactate (C) with 10 mM Sodium Chloride
-0.1
+0.3
+0.1
+0.0
-0.3
carbon source
PM with argon and butyrate 10 mM and Sodium bicarbonate 10 mM
+0.3
-0.1
-0.2
-0.0
+0.0
carbon source dark aerobic
PM with succinate aerobic in dark
+0.1
+0.2
-0.3
+0.1
+0.0
carbon source
Butyric Acid (C); anaerobic
+0.3
-0.3
+0.2
-0.0
-0.0
carbon source
PM with argon and butyrate 10 mM and Sodium bicarbonate 10 mM
+0.5
-0.1
-0.1
-0.2
+0.0
sulfur source
NFM with pyruvate
+0.4
-0.3
-0.1
+0.1
+0.1
carbon source
acetate trihydrate and Sodium L-Lactate (C)
+0.3
+0.4
-0.1
-0.2
-0.1
carbon source
MDC_bicarb with butyrate and Adenine
+0.3
-0.0
-0.0
+0.2
-0.1
carbon source
aspen wood chips that have been decomposed by a fungus (C)
+0.6
-0.2
-0.0
-0.0
+0.0
sulfur source
Thiamine HCl sulfur source
+0.3
+0.2
-0.1
+0.0
-0.1
remove
TX73_016335
plot
remove
TX73_016340
plot
remove
TX73_016345
remove
TX73_016350
plot
remove
TX73_016355
plot