Fitness for 5 genes in Rhodopseudomonas palustris CGA009

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 175 experiments or choose conditions or try the comparative fitness browser

500 ntTX73_016335 and TX73_016340 are separated by 6 nucleotidesTX73_016340 and TX73_016345 are separated by 74 nucleotidesTX73_016345 and TX73_016350 are separated by 54 nucleotidesTX73_016350 and TX73_016355 are separated by 53 nucleotides TX73_016335: TX73_016335 - DUF3253 domain-containing protein, at 3,567,269 to 3,567,553 _016335 TX73_016340: TX73_016340 - YdcF family protein, at 3,567,560 to 3,568,354 _016340 TX73_016345: TX73_016345 - aldo/keto reductase, at 3,568,429 to 3,569,262 _016345 TX73_016350: TX73_016350 - helix-turn-helix domain-containing protein, at 3,569,317 to 3,569,673 _016350 TX73_016355: TX73_016355 - magnesium transporter, at 3,569,727 to 3,571,148 _016355
Group Condition TX73_016335 TX73_016340 TX73_016345 TX73_016350 TX73_016355
stress PM_N2O with buyrate and 0.1 mM bicarb and 0.1 mM nitrate; in dark -0.2 +0.1 -0.6 +0.0 -0.0
carbon source MDC_bicarb with butyrate and Adenine -0.1 -0.1 -0.4 -0.0 -0.0
sulfur source control sulfur source control -0.8 +0.1 +0.1 -0.1 -0.1
survival starvation expt 3; 3 days; outgrowth in CAAc -0.4 -0.2 +0.1 -0.2 -0.0
survival outgrowth control starvation outgrowth control in CAAc -0.3 -0.2 -0.1 -0.1 -0.1
survival starvation expt 2; 14 days; outgrowth in CAAc -0.1 -0.3 +0.0 -0.2 -0.1
survival starvation expt 4; 14 days; outgrowth in CAAc -0.1 -0.3 +0.0 -0.1 -0.1
stress PM_N2O with buyrate and 0.1 mM bicarb and 0.1 mM nitrate; in dark -0.2 +0.0 -0.5 +0.0 +0.1
survival starvation expt 4; 3 days; outgrowth in CAAc -0.3 -0.1 -0.2 +0.0 -0.0
carbon source dark aerobic PM with succinate and Sodium Formate aerobic in dark -0.1 +0.1 -0.8 +0.2 -0.0
carbon source acetate trihydrate and Sodium L-Lactate (C) -0.6 +0.3 -0.0 -0.1 -0.1
carbon source PM with argon and bicarbonate 60 mM and Sodium thiosulfate 30 mM -0.3 +0.1 -0.2 -0.0 -0.1
carbon source acetate trihydrate and Sodium L-Lactate (C) +0.2 -0.0 -0.2 -0.4 -0.1
carbon source dark aerobic PM with succinate and Sodium Formate aerobic in dark +0.2 -0.1 -0.8 +0.2 +0.0
stress PM_N2O with buyrate and 0.1 mM bicarb and 0.1 mM nitrate; in dark -0.2 +0.0 -0.5 +0.2 +0.1
stress PM_N2O with buyrate and 0.1 mM bicarb and 0.1 mM nitrate; in dark +0.1 +0.1 -0.6 +0.1 +0.0
carbon source PM with argon and bicarbonate 60 mM and Sodium thiosulfate 30 mM -0.3 +0.3 -0.1 -0.2 -0.0
stress L-Lactate (C) with 10 mM Sodium Chloride +0.4 +0.2 -0.5 -0.2 -0.3
carbon source dark aerobic PM with succinate aerobic in dark +0.1 -0.2 -0.3 +0.1 +0.1
carbon source dark aerobic PM with butyrate aerobic in dark -0.4 +0.3 -0.1 +0.2 -0.0
stress L-Lactate (C) with 10 mM Sodium Chloride -0.1 +0.3 +0.1 +0.0 -0.3
carbon source PM with argon and butyrate 10 mM and Sodium bicarbonate 10 mM +0.3 -0.1 -0.2 -0.0 +0.0
carbon source dark aerobic PM with succinate aerobic in dark +0.1 +0.2 -0.3 +0.1 +0.0
carbon source Butyric Acid (C); anaerobic +0.3 -0.3 +0.2 -0.0 -0.0
carbon source PM with argon and butyrate 10 mM and Sodium bicarbonate 10 mM +0.5 -0.1 -0.1 -0.2 +0.0
sulfur source NFM with pyruvate +0.4 -0.3 -0.1 +0.1 +0.1
carbon source acetate trihydrate and Sodium L-Lactate (C) +0.3 +0.4 -0.1 -0.2 -0.1
carbon source MDC_bicarb with butyrate and Adenine +0.3 -0.0 -0.0 +0.2 -0.1
carbon source aspen wood chips that have been decomposed by a fungus (C) +0.6 -0.2 -0.0 -0.0 +0.0
sulfur source Thiamine HCl sulfur source +0.3 +0.2 -0.1 +0.0 -0.1
remove
TX73_016335
plot
remove
TX73_016340
plot
remove
TX73_016345
remove
TX73_016350
plot
remove
TX73_016355
plot