Fitness for 5 genes in Rhodopseudomonas palustris CGA009

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500 ntTX73_015795 and TX73_015800 are separated by 491 nucleotidesTX73_015800 and TX73_015805 are separated by 82 nucleotidesTX73_015805 and TX73_015810 are separated by 72 nucleotidesTX73_015810 and TX73_015815 are separated by 146 nucleotides TX73_015795: TX73_015795 - cold-shock protein, at 3,456,175 to 3,456,378 _015795 TX73_015800: TX73_015800 - Crp/Fnr family transcriptional regulator, at 3,456,870 to 3,457,643 _015800 TX73_015805: TX73_015805 - TerC family protein, at 3,457,726 to 3,458,547 _015805 TX73_015810: TX73_015810 - nucleoside-diphosphate kinase, at 3,458,620 to 3,459,042 _015810 TX73_015815: TX73_015815 - ABC-F family ATP-binding cassette domain-containing protein, at 3,459,189 to 3,461,066 _015815
Group Condition TX73_015795 TX73_015800 TX73_015805 TX73_015810 TX73_015815
carbon source PM with argon and bicarbonate 20 mM and Sodium thiosulfate 50 mM +0.1 -0.7 -0.3 N.D. -0.2
carbon source Fumarate (C); anaerobic -0.1 -0.4 -0.1 N.D. -0.1
sulfur source Taurine sulfur source -0.1 -0.4 -0.2 N.D. -0.0
survival starvation expt 2; 14 days; outgrowth in CAAc -0.0 -0.7 +0.1 N.D. -0.0
stress L-Lactate (C) with 10 mM Sodium Chloride +0.1 -0.5 -0.1 N.D. -0.2
carbon source acetate trihydrate and Sodium L-Lactate (C) -0.4 -0.2 -0.1 N.D. +0.2
carbon source acetate trihydrate and Sodium L-Lactate (C) -0.5 +0.0 +0.1 N.D. -0.1
survival starvation expt 4; 14 days; outgrowth in CAAc +0.1 -0.6 +0.1 N.D. +0.0
sulfur source Dimethylsulfoniopropionate sulfur source -0.1 +0.4 -0.1 N.D. -0.4
sulfur source control sulfur source control -0.4 -0.2 +0.2 N.D. +0.2
sulfur source NFM with pyruvate -0.1 -0.0 -0.3 N.D. +0.3
survival starvation expt 2; 3 days; outgrowth in CAAc +0.1 -0.5 +0.2 N.D. +0.1
carbon source dark aerobic PM with succinate aerobic in dark +0.2 +0.1 -0.2 N.D. -0.2
carbon source MDC_bicarb with butyrate -0.1 +0.3 -0.3 N.D. -0.1
sulfur source Dimethylsulfoniopropionate sulfur source +0.0 +0.4 +0.0 N.D. -0.4
survival outgrowth control starvation outgrowth control in CAAc +0.2 -0.4 +0.1 N.D. +0.2
survival starvation expt 4; 3 days; outgrowth in CAAc +0.2 -0.3 -0.0 N.D. +0.2
survival starvation expt 1; 14 days; outgrowth in CAAc +0.2 -0.4 +0.2 N.D. +0.1
carbon source MDC_bicarb with butyrate +0.0 +0.5 -0.0 N.D. -0.2
carbon source MDC_bicarb with butyrate and Adenine +0.2 +0.3 -0.1 N.D. -0.1
carbon source aspen wood chips that have been decomposed by a fungus (C) +0.2 +0.3 -0.0 N.D. -0.1
carbon source 4-Hydroxybenzoate (C) +0.0 +0.7 -0.2 N.D. -0.0
carbon source MDC_bicarb with butyrate +0.2 +0.4 -0.1 N.D. -0.1
carbon source 4-Hydroxybenzoate (C) -0.0 +0.9 -0.1 N.D. -0.1
carbon source 4-Hydroxybenzoate (C) -0.1 +0.7 -0.1 N.D. +0.1
carbon source PM with Formate and Sodium bicarbonate anaerobic with light -0.2 +1.2 -0.0 N.D. -0.1
carbon source dark aerobic PM with succinate and Sodium Formate aerobic in dark +0.4 +1.0 -0.2 N.D. -0.2
carbon source PM with Formate and Sodium bicarbonate anaerobic with light -0.1 +1.4 -0.1 N.D. -0.1
carbon source PM with Formate and Sodium bicarbonate anaerobic with light -0.1 +1.4 -0.1 N.D. +0.0
carbon source dark aerobic PM with succinate and Sodium Formate aerobic in dark +0.3 +1.3 -0.2 N.D. -0.2
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