Fitness for 5 genes in Rhodopseudomonas palustris CGA009

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500 ntTX73_015705 and TX73_015710 are separated by 28 nucleotidesTX73_015710 and TX73_015715 are separated by 1283 nucleotidesTX73_015715 and TX73_015720 are separated by 179 nucleotidesTX73_015720 and TX73_015725 are separated by 153 nucleotides TX73_015705: TX73_015705 - hypothetical protein, at 3,434,341 to 3,434,604 _015705 TX73_015710: TX73_015710 - hypothetical protein, at 3,434,633 to 3,435,007 _015710 TX73_015715: TX73_015715 - CreA family protein, at 3,436,291 to 3,436,839 _015715 TX73_015720: TX73_015720 - L,D-transpeptidase, at 3,437,019 to 3,438,632 _015720 TX73_015725: TX73_015725 - polysaccharide deacetylase family protein, at 3,438,786 to 3,439,724 _015725
Group Condition TX73_015705 TX73_015710 TX73_015715 TX73_015720 TX73_015725
carbon source PM with argon and bicarbonate 20 mM and Sodium thiosulfate 50 mM -0.5 -0.0 -0.1 -0.2 -0.1
carbon source dark aerobic PM with butyrate aerobic in dark -0.3 -0.1 -0.1 -0.2 -0.1
carbon source PM with argon and bicarbonate 20 mM and Sodium thiosulfate 50 mM -0.7 -0.2 +0.1 +0.0 -0.0
carbon source PM with argon and bicarbonate 20 mM and Sodium thiosulfate 50 mM -0.6 -0.0 -0.0 -0.2 +0.1
carbon source PM with succinate and Sodium Formate anaerobic with light -0.1 +0.1 -0.9 +0.0 +0.0
sulfur source Thiamine HCl sulfur source -0.3 -0.1 -0.2 -0.1 -0.1
carbon source PM with succinate and Sodium Formate anaerobic with light -0.1 +0.0 -0.7 +0.0 -0.1
sulfur source sodium isethionate sulfur source -0.5 -0.0 -0.3 -0.1 +0.1
stress PM_N2O butyrate and nitrate 0.1 mM -0.2 +0.0 -0.4 -0.1 +0.1
sulfur source NFM with pyruvate -0.4 +0.2 +0.0 -0.2 -0.2
carbon source dark aerobic PM with succinate and Sodium Formate aerobic in dark +0.1 -0.1 -0.4 -0.0 -0.1
carbon source dark aerobic PM with butyrate aerobic in dark -0.3 -0.0 +0.2 -0.3 -0.1
sulfur source Taurine sulfur source -0.5 -0.1 -0.0 -0.1 +0.2
carbon source MDC_bicarb with butyrate -0.4 -0.1 -0.0 -0.2 +0.2
survival starvation expt 1; 7 days; outgrowth in CAAc +0.1 -0.0 -0.4 +0.1 -0.1
carbon source PM with succinate and Sodium Formate anaerobic with light +0.2 +0.0 -0.6 +0.0 +0.1
survival starvation expt 4; 3 days; outgrowth in CAAc +0.1 -0.0 -0.4 +0.3 +0.2
survival outgrowth control starvation outgrowth control in CAAc +0.2 -0.1 -0.3 +0.2 +0.0
survival outgrowth control starvation outgrowth control in CAAc +0.1 -0.0 -0.3 +0.3 +0.0
carbon source acetate trihydrate and Sodium L-Lactate (C) -0.1 +0.0 +0.2 +0.4 -0.3
carbon source acetate trihydrate and Sodium L-Lactate (C) -0.4 -0.1 +0.1 +0.3 +0.3
survival starvation expt 1; 14 days; outgrowth in CAAc +0.1 +0.1 -0.3 +0.2 +0.1
survival starvation expt 4; 14 days; outgrowth in CAAc +0.2 +0.1 -0.4 +0.2 +0.1
survival starvation expt 3; 7 days; outgrowth in CAAc +0.3 +0.1 -0.4 +0.2 +0.1
survival starvation expt 3; 3 days; outgrowth in CAAc +0.4 +0.1 -0.3 +0.2 -0.2
survival starvation expt 4; 7 days; outgrowth in CAAc +0.3 +0.1 -0.4 +0.2 +0.1
stress L-Lactate (C) with 10 mM Sodium Chloride -0.1 -0.1 +0.0 +0.5 +0.1
carbon source Citraconic (C); anaerobic +0.4 +0.2 +0.0 +0.2 -0.0
stress L-Lactate (C) with 10 mM Sodium Chloride -0.2 +0.3 +0.3 +0.2 +0.2
carbon source 4-Hydroxybenzoate (C) +0.7 -0.1 -0.1 +0.5 -0.1
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TX73_015705
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TX73_015710
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TX73_015720
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TX73_015725
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