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Protein
Homologs
Fitness for 5 genes in
Rhodopseudomonas palustris CGA009
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500 nt
TX73_015370 and TX73_015375 are separated by 5 nucleotides
TX73_015375 and TX73_015380 are separated by 48 nucleotides
TX73_015380 and TX73_015385 are separated by 411 nucleotides
TX73_015385 and TX73_015390 are separated by 89 nucleotides
TX73_015370: TX73_015370 - MarR family transcriptional regulator, at 3,356,682 to 3,357,155
_015370
TX73_015375: TX73_015375 - multicopper oxidase domain-containing protein, at 3,357,161 to 3,358,483
_015375
TX73_015380: TX73_015380 - bifunctional ADP-dependent NAD(P)H-hydrate dehydratase/NAD(P)H-hydrate epimerase, at 3,358,532 to 3,360,031
_015380
TX73_015385: TX73_015385 - P-II family nitrogen regulator, at 3,360,443 to 3,360,781
_015385
TX73_015390: TX73_015390 - type I glutamate--ammonia ligase, at 3,360,871 to 3,362,280
_015390
Group
Condition
TX73
_015370
TX73
_015375
TX73
_015380
TX73
_015385
TX73
_015390
sulfur source control
Dimethyl sulfide sulfur source
-0.1
-0.0
-0.9
N.D.
N.D.
sulfur source control
Dimethyl sulfide sulfur source
-0.1
+0.0
-1.0
N.D.
N.D.
stress
PM_argon75_N2O25 butyrate and Chloride 0.1 mM
-0.0
+0.0
-1.0
N.D.
N.D.
sulfur source
Dimethylsulfoniopropionate sulfur source
-0.1
+0.0
-0.8
N.D.
N.D.
carbon source dark aerobic
PM with succinate and Sodium Formate aerobic in dark
+0.2
-0.1
-1.0
N.D.
N.D.
stress
PM_N2O butyrate and nitrate 0.1 mM
+0.1
-0.0
-0.9
N.D.
N.D.
sulfur source control
Dimethyl sulfide sulfur source
+0.0
-0.1
-0.9
N.D.
N.D.
sulfur source
Dimethylsulfoniopropionate sulfur source
-0.0
+0.0
-0.8
N.D.
N.D.
stress
PM_N2O butyrate and nitrate 0.1 mM
+0.0
-0.0
-0.8
N.D.
N.D.
carbon source dark aerobic
PM with succinate and Sodium Formate aerobic in dark
+0.0
-0.0
-0.8
N.D.
N.D.
sulfur source
Dimethylsulfoniopropionate sulfur source
+0.0
+0.1
-0.9
N.D.
N.D.
stress
PM_argon75_N2O25 butyrate and Chloride 0.1 mM
+0.2
-0.0
-0.9
N.D.
N.D.
stress
PM_N2O butyrate and nitrate 0.1 mM
+0.1
+0.0
-0.8
N.D.
N.D.
stress
PM_N2O butyrate and nitrate 0.1 mM
+0.0
+0.0
-0.7
N.D.
N.D.
sulfur source
Sulfoacetic sulfur source
-0.0
-0.0
-0.5
N.D.
N.D.
stress
PM_argon75_N2O25 butyrate and Chloride 0.1 mM
+0.1
+0.1
-0.7
N.D.
N.D.
stress
PM_argon75_N2O25 butyrate and Chloride 0.1 mM
+0.1
+0.1
-0.7
N.D.
N.D.
sulfur source
Sulfoacetic sulfur source
-0.0
-0.1
-0.4
N.D.
N.D.
carbon source
PM with Formate and Sodium bicarbonate anaerobic with light
+0.1
-0.1
-0.4
N.D.
N.D.
sulfur source
Taurine sulfur source
+0.1
-0.1
-0.4
N.D.
N.D.
stress
PM_N2O with buyrate and 0.1 mM bicarb and 0.1 mM nitrate; in dark
+0.0
-0.1
-0.3
N.D.
N.D.
carbon source
PM with succinate anaerobic with light
+0.1
-0.0
-0.4
N.D.
N.D.
carbon source
PM with Formate and Sodium bicarbonate anaerobic with light
+0.2
-0.1
-0.4
N.D.
N.D.
stress
PM_argon75_N2O25 with buyrate and 0.1 mM nitrate; in dark
+0.1
-0.1
-0.4
N.D.
N.D.
sulfur source
NFM_No_Mo_Plus_VCl3 with acetate trihydrate
+0.1
-0.1
-0.3
N.D.
N.D.
sulfur source
ethyl methyl sulfide sulfur source
+0.1
-0.0
-0.5
N.D.
N.D.
stress
L-Lactate (C) with 10 mM Sodium Chloride
+0.0
+0.1
-0.5
N.D.
N.D.
sulfur source
ethyl methyl sulfide sulfur source
+0.1
+0.1
-0.4
N.D.
N.D.
carbon source
PM with succinate and Sodium Formate anaerobic with light
+0.1
-0.1
-0.3
N.D.
N.D.
sulfur source
NFM with pyruvate
+0.3
-0.1
+0.2
N.D.
N.D.
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