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Protein
Homologs
Fitness for 5 genes in
Rhodopseudomonas palustris CGA009
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
TX73_015070 and TX73_015075 are separated by 149 nucleotides
TX73_015075 and TX73_015080 overlap by 4 nucleotides
TX73_015080 and TX73_015085 are separated by 18 nucleotides
TX73_015085 and TX73_015090 are separated by 8 nucleotides
TX73_015070: TX73_015070 - nucleoside deaminase, at 3,287,611 to 3,288,255
_015070
TX73_015075: TX73_015075 - lipid-A-disaccharide synthase, at 3,288,405 to 3,289,586
_015075
TX73_015080: TX73_015080 - UDP-2,3-diacylglucosamine diphosphatase LpxI, at 3,289,583 to 3,290,440
_015080
TX73_015085: TX73_015085 - acyl-ACP--UDP-N-acetylglucosamine O-acyltransferase, at 3,290,459 to 3,291,301
_015085
TX73_015090: TX73_015090 - 3-hydroxyacyl-ACP dehydratase FabZ, at 3,291,310 to 3,291,765
_015090
Group
Condition
TX73
_015070
TX73
_015075
TX73
_015080
TX73
_015085
TX73
_015090
carbon source dark aerobic
PM with butyrate aerobic in dark
-0.4
N.D.
N.D.
N.D.
N.D.
carbon source
L-Leucine (C); anaerobic
-0.3
N.D.
N.D.
N.D.
N.D.
carbon source
acetate trihydrate and Sodium L-Lactate (C)
-0.3
N.D.
N.D.
N.D.
N.D.
sulfur source
sodium isethionate sulfur source
-0.3
N.D.
N.D.
N.D.
N.D.
sulfur source
NFM with pyruvate
-0.2
N.D.
N.D.
N.D.
N.D.
monoculture
OAcsForEtOH (C); monoculture
-0.2
N.D.
N.D.
N.D.
N.D.
sulfur source control
Dimethyl sulfide sulfur source
-0.2
N.D.
N.D.
N.D.
N.D.
carbon source
aspen wood chips that have been decomposed by a fungus (C)
-0.2
N.D.
N.D.
N.D.
N.D.
survival outgrowth control
starvation outgrowth control in CAAc
-0.2
N.D.
N.D.
N.D.
N.D.
carbon source dark aerobic
PM with butyrate aerobic in dark
-0.2
N.D.
N.D.
N.D.
N.D.
carbon source
PM with argon and bicarbonate 20 mM and Sodium thiosulfate 50 mM
-0.2
N.D.
N.D.
N.D.
N.D.
carbon source
MDC_bicarb with butyrate and Adenine
-0.2
N.D.
N.D.
N.D.
N.D.
stress
PM_argon75_N2O25 butyrate and Chloride 0.1 mM
-0.2
N.D.
N.D.
N.D.
N.D.
carbon source
Fumarate (C); anaerobic
-0.2
N.D.
N.D.
N.D.
N.D.
survival outgrowth control
starvation outgrowth control in CAAc
-0.2
N.D.
N.D.
N.D.
N.D.
carbon source
PM with Formate and Sodium bicarbonate anaerobic with light
+0.2
N.D.
N.D.
N.D.
N.D.
sulfur source
NFM_No_Mo with acetate trihydrate
+0.2
N.D.
N.D.
N.D.
N.D.
sulfur source
NFM with succinate
+0.2
N.D.
N.D.
N.D.
N.D.
carbon source
PM with argon and butyrate 10 mM and Sodium bicarbonate 10 mM
+0.2
N.D.
N.D.
N.D.
N.D.
carbon source
Citraconic (C); anaerobic
+0.2
N.D.
N.D.
N.D.
N.D.
carbon source
acetate trihydrate (C)
+0.2
N.D.
N.D.
N.D.
N.D.
stress
L-Lactate (C) with 10 mM Sodium Chloride
+0.2
N.D.
N.D.
N.D.
N.D.
carbon source dark aerobic
PM with succinate aerobic in dark
+0.2
N.D.
N.D.
N.D.
N.D.
sulfur source
NFM with succinate
+0.2
N.D.
N.D.
N.D.
N.D.
stress
PM_argon75_N2O25 butyrate and Chloride 0.1 mM
+0.2
N.D.
N.D.
N.D.
N.D.
sulfur source
NFM with succinate
+0.2
N.D.
N.D.
N.D.
N.D.
carbon source
PM with succinate and Sodium Formate anaerobic with light
+0.2
N.D.
N.D.
N.D.
N.D.
carbon source
acetate trihydrate and Sodium L-Lactate (C)
+0.3
N.D.
N.D.
N.D.
N.D.
carbon source
4-Hydroxybenzoate (C)
+0.3
N.D.
N.D.
N.D.
N.D.
sulfur source
NFM_No_Mo with acetate trihydrate
+0.3
N.D.
N.D.
N.D.
N.D.
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