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Fitness for 5 genes in
Rhodopseudomonas palustris CGA009
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
TX73_014980 and TX73_014985 are separated by 130 nucleotides
TX73_014985 and TX73_014990 are separated by 10 nucleotides
TX73_014990 and TX73_014995 are separated by 37 nucleotides
TX73_014995 and TX73_015000 are separated by 127 nucleotides
TX73_014980: TX73_014980 - anthranilate phosphoribosyltransferase, at 3,267,978 to 3,268,994
_014980
TX73_014985: TX73_014985 - indole-3-glycerol phosphate synthase TrpC, at 3,269,125 to 3,269,922
_014985
TX73_014990: TX73_014990 - cyclic pyranopterin monophosphate synthase MoaC, at 3,269,933 to 3,270,463
_014990
TX73_014995: TX73_014995 - cation-translocating P-type ATPase, at 3,270,501 to 3,273,059
_014995
TX73_015000: TX73_015000 - hypothetical protein, at 3,273,187 to 3,273,909
_015000
Group
Condition
TX73
_014980
TX73
_014985
TX73
_014990
TX73
_014995
TX73
_015000
carbon source
4-Hydroxybenzoate (C)
N.D.
N.D.
-5.4
-0.1
-0.0
carbon source
4-Hydroxybenzoate (C)
N.D.
N.D.
-4.8
-0.1
-0.2
carbon source
4-Hydroxybenzoate (C)
N.D.
N.D.
-4.2
-0.0
-0.0
carbon source dark aerobic
PM with succinate and Sodium Formate aerobic in dark
N.D.
N.D.
-4.2
-0.0
+0.1
carbon source dark aerobic
PM with succinate and Sodium Formate aerobic in dark
N.D.
N.D.
-4.1
+0.0
+0.1
carbon source
PM with Formate and Sodium bicarbonate anaerobic with light
N.D.
N.D.
-3.4
-0.0
-0.1
carbon source
4-Aminobutyric (C); anaerobic
N.D.
N.D.
-2.3
-0.0
+0.0
carbon source
PM with argon and bicarbonate 20 mM and Sodium thiosulfate 50 mM
N.D.
N.D.
-2.4
+0.0
+0.1
carbon source
PM with Formate and Sodium bicarbonate anaerobic with light
N.D.
N.D.
-2.4
+0.1
+0.2
carbon source
PM with Formate and Sodium bicarbonate anaerobic with light
N.D.
N.D.
-2.1
+0.0
+0.1
carbon source
PM with argon and bicarbonate 20 mM and Sodium thiosulfate 50 mM
N.D.
N.D.
-2.0
+0.1
-0.1
carbon source
4-Aminobutyric (C); anaerobic
N.D.
N.D.
-1.9
+0.0
-0.0
carbon source
4-Aminobutyric (C); anaerobic
N.D.
N.D.
-1.8
-0.0
+0.0
carbon source
PM with argon and bicarbonate 20 mM and Sodium thiosulfate 50 mM
N.D.
N.D.
-1.9
+0.1
+0.2
carbon source
4-Aminobutyric (C); anaerobic
N.D.
N.D.
-1.8
-0.0
+0.2
carbon source
PM with argon and bicarbonate 20 mM and Sodium thiosulfate 50 mM
N.D.
N.D.
-1.8
+0.0
+0.3
sulfur source
NFM with succinate
N.D.
N.D.
-0.9
-0.0
+0.2
sulfur source
NFM with succinate
N.D.
N.D.
-0.8
+0.1
+0.3
sulfur source
NFM with succinate
N.D.
N.D.
-0.7
+0.1
+0.2
carbon source
Citraconic (C); anaerobic
N.D.
N.D.
-0.5
+0.0
+0.2
stress
L-Lactate (C) with 10 mM Sodium Chloride
N.D.
N.D.
+0.4
-0.1
-0.5
carbon source
PM with argon and bicarbonate 60 mM and Sodium thiosulfate 30 mM
N.D.
N.D.
-0.6
+0.0
+0.5
stress
L-Lactate (C) with 10 mM Sodium Chloride
N.D.
N.D.
+0.9
+0.0
-0.3
stress
L-Lactate (C) with 10 mM Sodium Chloride
N.D.
N.D.
+1.1
+0.1
-0.3
sulfur source
NFM with pyruvate
N.D.
N.D.
+0.9
+0.2
-0.1
carbon source
MDC_bicarb with butyrate
N.D.
N.D.
+0.8
+0.1
+0.2
carbon source
MDC_bicarb with butyrate
N.D.
N.D.
+1.1
-0.1
+0.2
carbon source
MDC_bicarb with butyrate
N.D.
N.D.
+1.2
+0.0
+0.1
carbon source
MDC_bicarb with butyrate
N.D.
N.D.
+1.3
+0.0
+0.1
sulfur source
NFM with pyruvate
N.D.
N.D.
+1.0
+0.3
+0.2
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