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Protein
Homologs
Fitness for 5 genes in
Rhodopseudomonas palustris CGA009
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
TX73_014910 and TX73_014915 overlap by 4 nucleotides
TX73_014915 and TX73_014920 overlap by 1 nucleotides
TX73_014920 and TX73_014925 overlap by 4 nucleotides
TX73_014925 and TX73_014930 are separated by 146 nucleotides
TX73_014910: TX73_014910 - glucans biosynthesis glucosyltransferase MdoH, at 3,254,739 to 3,256,904
_014910
TX73_014915: TX73_014915 - MFS transporter, at 3,256,901 to 3,258,127
_014915
TX73_014920: TX73_014920 - 3-deoxy-8-phosphooctulonate synthase, at 3,258,127 to 3,258,990
_014920
TX73_014925: TX73_014925 - VOC family protein, at 3,258,987 to 3,259,856
_014925
TX73_014930: TX73_014930 - NIPSNAP family protein, at 3,260,003 to 3,260,329
_014930
Group
Condition
TX73
_014910
TX73
_014915
TX73
_014920
TX73
_014925
TX73
_014930
sulfur source
NFM_No_Mo with acetate trihydrate
-0.1
-0.2
N.D.
-0.6
-0.4
carbon source dark aerobic
PM with succinate and Sodium Formate aerobic in dark
+0.0
+0.1
N.D.
-0.8
-0.3
sulfur source
Dimethylsulfoniopropionate sulfur source
-0.0
-0.1
N.D.
-0.1
-0.7
carbon source dark aerobic
PM with succinate aerobic in dark
-0.1
-0.1
N.D.
-0.4
-0.3
sulfur source
NFM_No_Mo with acetate trihydrate
+0.1
-0.2
N.D.
-0.4
-0.2
carbon source dark aerobic
PM with butyrate aerobic in dark
-0.0
-0.1
N.D.
-0.2
-0.4
sulfur source control
sulfur source control
-0.1
-0.0
N.D.
+0.0
-0.5
carbon source
MDC_bicarb with butyrate and Adenine
-0.0
+0.1
N.D.
-0.4
-0.3
carbon source
PM with Formate and Sodium bicarbonate anaerobic with light
-0.1
+0.0
N.D.
-0.5
-0.1
carbon source dark aerobic
PM with succinate aerobic in dark
+0.1
+0.0
N.D.
-0.4
-0.4
carbon source
L-Leucine (C); anaerobic
+0.0
+0.1
N.D.
+0.3
-0.7
sulfur source
NFM with succinate
+0.1
-0.2
N.D.
-0.3
+0.2
carbon source dark aerobic
PM with succinate and Sodium Formate aerobic in dark
+0.0
+0.1
N.D.
-0.5
+0.3
carbon source
Azelaic (C); anaerobic
+0.1
+0.1
N.D.
+0.2
-0.4
carbon source
4-Hydroxybenzoate (C)
+0.1
-0.1
N.D.
+0.3
-0.2
carbon source
PM with succinate anaerobic with light
-0.0
-0.2
N.D.
-0.1
+0.4
carbon source
PM with argon and bicarbonate 60 mM and Sodium thiosulfate 30 mM
-0.0
-0.1
N.D.
-0.4
+0.6
stress
L-Lactate (C) with 10 mM Sodium Chloride
-0.2
+0.2
N.D.
+0.7
-0.5
sulfur source
Thiamine HCl sulfur source
+0.0
-0.1
N.D.
-0.3
+0.5
survival outgrowth control
starvation outgrowth control in CAAc
-0.0
+0.2
N.D.
+0.3
-0.2
survival outgrowth control
starvation outgrowth control in CAAc
-0.1
+0.2
N.D.
+0.3
-0.1
sulfur source
NFM with pyruvate
+0.0
-0.3
N.D.
+0.5
+0.1
sulfur source
sodium isethionate sulfur source
-0.2
+0.1
N.D.
+0.3
+0.2
carbon source
PM with argon and bicarbonate 60 mM and Sodium thiosulfate 30 mM
-0.0
+0.1
N.D.
-0.1
+0.5
carbon source
Pimelic (C); anaerobic
-0.2
+0.1
N.D.
+0.2
+0.4
carbon source
acetate trihydrate and Sodium L-Lactate (C)
-0.3
+0.2
N.D.
+0.6
+0.1
stress
L-Lactate (C) with 10 mM Sodium Chloride
-0.1
+0.2
N.D.
+0.4
+0.1
carbon source
Butyric Acid (C); anaerobic
-0.0
+0.0
N.D.
+0.5
+0.2
survival
starvation expt 2; 7 days; outgrowth in CAAc
+0.0
+0.2
N.D.
+0.3
+0.4
carbon source
acetate trihydrate and Sodium L-Lactate (C)
-0.1
-0.1
N.D.
+0.6
+0.5
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