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Protein
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Fitness for 5 genes in
Rhodopseudomonas palustris CGA009
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
TX73_014900 and TX73_014905 are separated by 100 nucleotides
TX73_014905 and TX73_014910 overlap by 13 nucleotides
TX73_014910 and TX73_014915 overlap by 4 nucleotides
TX73_014915 and TX73_014920 overlap by 1 nucleotides
TX73_014900: TX73_014900 - NAD(+) synthase, at 3,252,800 to 3,253,145
_014900
TX73_014905: TX73_014905 - glucan biosynthesis protein G, at 3,253,246 to 3,254,751
_014905
TX73_014910: TX73_014910 - glucans biosynthesis glucosyltransferase MdoH, at 3,254,739 to 3,256,904
_014910
TX73_014915: TX73_014915 - MFS transporter, at 3,256,901 to 3,258,127
_014915
TX73_014920: TX73_014920 - 3-deoxy-8-phosphooctulonate synthase, at 3,258,127 to 3,258,990
_014920
Group
Condition
TX73
_014900
TX73
_014905
TX73
_014910
TX73
_014915
TX73
_014920
carbon source
PM with argon and butyrate 10 mM and Sodium bicarbonate 10 mM
-0.2
-0.1
-0.1
-0.1
N.D.
stress
L-Lactate (C) with 10 mM Sodium Chloride
-0.5
+0.0
-0.2
+0.2
N.D.
carbon source dark aerobic
PM with butyrate aerobic in dark
-0.2
-0.1
-0.0
-0.1
N.D.
carbon source
PM with succinate anaerobic with light
-0.2
+0.0
-0.0
-0.2
N.D.
carbon source
MDC_bicarb with butyrate
-0.3
-0.0
+0.1
+0.0
N.D.
stress
PM_argon75_N2O25 butyrate and nitrate 0.1 mM
-0.2
-0.1
-0.1
+0.2
N.D.
carbon source
acetate trihydrate and Sodium L-Lactate (C)
-0.1
+0.2
-0.3
+0.2
N.D.
carbon source
aspen wood chips that have been decomposed by a fungus (C)
+0.2
+0.1
-0.0
-0.2
N.D.
sulfur source
sodium isethionate sulfur source
+0.1
-0.1
-0.2
+0.1
N.D.
sulfur source
NFM with pyruvate
-0.2
-0.0
+0.2
-0.0
N.D.
sulfur source
NFM_No_Mo with acetate trihydrate
+0.2
+0.0
+0.1
-0.2
N.D.
carbon source
aspen wood chips that have been decomposed by a fungus (C)
+0.2
-0.1
+0.1
-0.1
N.D.
carbon source
acetate trihydrate and Sodium L-Lactate (C)
+0.2
+0.2
-0.1
-0.1
N.D.
carbon source
Pimelic (C); anaerobic
+0.1
+0.1
-0.2
+0.1
N.D.
stress
PM_argon75_N2O25 butyrate and Chloride 0.1 mM
+0.1
-0.0
-0.1
+0.2
N.D.
sulfur source
Taurine sulfur source
+0.3
+0.0
-0.1
-0.1
N.D.
sulfur source
NFM with pyruvate
+0.3
+0.1
+0.0
-0.3
N.D.
stress
L-Lactate (C) with 10 mM Sodium Chloride
-0.2
+0.2
-0.1
+0.2
N.D.
survival outgrowth control
starvation outgrowth control in CAAc
+0.1
+0.1
-0.1
+0.2
N.D.
carbon source
MDC_bicarb with butyrate
+0.3
+0.1
-0.0
-0.1
N.D.
survival outgrowth control
starvation outgrowth control in CAAc
+0.2
-0.0
-0.0
+0.2
N.D.
carbon source
Citraconic (C); anaerobic
+0.2
-0.1
+0.0
+0.1
N.D.
carbon source
Fumarate (C); anaerobic
+0.2
+0.0
-0.0
+0.2
N.D.
carbon source
acetate trihydrate and Sodium L-Lactate (C)
-0.1
+0.3
+0.0
+0.3
N.D.
carbon source
Sebacic (C); anaerobic
+0.2
+0.1
+0.0
+0.2
N.D.
carbon source
Butyric Acid (C); anaerobic
+0.3
+0.1
+0.0
+0.2
N.D.
stress
Benzoate (C), sodium fluoride stress
+0.1
+0.1
+0.3
+0.0
N.D.
carbon source
Azelaic (C); anaerobic
+0.3
+0.0
+0.1
+0.1
N.D.
carbon source
Citraconic (C); anaerobic
+0.4
+0.0
+0.1
+0.1
N.D.
carbon source
4-Aminobutyric (C); anaerobic
+0.3
+0.0
+0.1
+0.2
N.D.
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