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Protein
Homologs
Fitness for 5 genes in
Rhodopseudomonas palustris CGA009
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
TX73_014470 and TX73_014475 are separated by 24 nucleotides
TX73_014475 and TX73_014480 are separated by 20 nucleotides
TX73_014480 and TX73_014485 are separated by 153 nucleotides
TX73_014485 and TX73_014490 are separated by 107 nucleotides
TX73_014470: TX73_014470 - monovalent cation/H(+) antiporter subunit G, at 3,168,802 to 3,169,173
_014470
TX73_014475: TX73_014475 - YggS family pyridoxal phosphate-dependent enzyme, at 3,169,198 to 3,169,980
_014475
TX73_014480: TX73_014480 - serine hydroxymethyltransferase, at 3,170,001 to 3,171,305
_014480
TX73_014485: TX73_014485 - PLP-dependent aminotransferase family protein, at 3,171,459 to 3,172,949
_014485
TX73_014490: TX73_014490 - benzoate/H(+) symporter BenE family transporter, at 3,173,057 to 3,174,289
_014490
Group
Condition
TX73
_014470
TX73
_014475
TX73
_014480
TX73
_014485
TX73
_014490
stress
L-Lactate (C) with 10 mM Sodium Chloride
-0.6
-0.3
+0.1
-0.0
-0.6
carbon source
acetate trihydrate and Sodium L-Lactate (C)
-0.1
+0.1
-0.6
-0.4
-0.3
stress
L-Lactate (C) with 10 mM Sodium Chloride
-0.8
+0.0
-0.1
-0.1
-0.2
carbon source
acetate trihydrate and Sodium L-Lactate (C)
-0.6
-0.0
-0.1
-0.2
-0.2
carbon source
acetate trihydrate and Sodium L-Lactate (C)
-0.2
+0.1
-0.3
-0.3
-0.4
stress
L-Lactate (C) with 10 mM Sodium Chloride
-0.6
+0.2
+0.0
-0.3
-0.2
sulfur source
NFM with pyruvate
-0.2
-0.6
+0.1
+0.1
+0.1
carbon source
PM with argon and butyrate 10 mM and Sodium bicarbonate 10 mM
-0.4
+0.1
-0.0
-0.1
-0.1
carbon source
L-Leucine (C); anaerobic
-0.0
+0.2
-0.2
+0.1
-0.3
sulfur source
Sulfoacetic sulfur source
-0.2
+0.2
-0.1
+0.1
-0.0
sulfur source
NFM with pyruvate
+0.4
-0.4
+0.1
+0.2
-0.3
carbon source
MDC_bicarb with butyrate and Adenine
-0.0
-0.2
-0.2
+0.0
+0.3
carbon source
MDC_bicarb with butyrate
+0.1
-0.3
+0.3
-0.0
-0.0
carbon source
PM with succinate anaerobic with light
-0.3
-0.1
+0.1
+0.1
+0.3
carbon source
PM with Formate and Sodium bicarbonate anaerobic with light
+0.6
-0.2
-0.2
+0.1
+0.2
sulfur source control
sulfur source control
-0.1
+0.2
+0.1
+0.2
+0.2
carbon source
PM with argon and bicarbonate 20 mM and Sodium thiosulfate 50 mM
+0.0
-0.1
+0.3
+0.2
+0.2
carbon source
PM with argon and bicarbonate 60 mM and Sodium thiosulfate 30 mM
+0.1
+0.4
+0.1
+0.1
-0.0
sulfur source control
Dimethyl sulfide sulfur source
+0.4
+0.2
+0.0
+0.1
+0.0
carbon source
PM with argon and bicarbonate 60 mM and Sodium thiosulfate 30 mM
+0.2
-0.0
+0.3
+0.1
+0.2
stress
PM_argon75_N2O25 butyrate and Chloride 0.1 mM
+0.3
+0.2
-0.2
+0.2
+0.3
carbon source dark aerobic
PM with succinate aerobic in dark
+0.1
+0.1
+0.1
+0.3
+0.1
carbon source
PM with Formate and Sodium bicarbonate anaerobic with light
+0.4
+0.0
+0.0
+0.1
+0.2
stress
PM_argon75_N2O25 butyrate and Chloride 0.1 mM
-0.1
+0.3
+0.2
+0.2
+0.2
carbon source
PM with succinate and Sodium Formate anaerobic with light
+0.2
+0.0
+0.2
+0.1
+0.2
carbon source
aspen wood chips that have been decomposed by a fungus (C)
-0.0
+0.3
+0.3
+0.0
+0.1
carbon source
PM with argon and bicarbonate 20 mM and Sodium thiosulfate 50 mM
+0.1
+0.1
+0.1
+0.3
+0.2
carbon source dark aerobic
PM with succinate and Sodium Formate aerobic in dark
+0.7
+0.2
-0.2
+0.1
+0.2
sulfur source
NFM_No_Mo with acetate trihydrate
+0.2
+0.3
+0.3
+0.1
+0.1
carbon source
PM with Formate and Sodium bicarbonate anaerobic with light
+0.7
-0.0
+0.3
+0.2
+0.1
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