Fitness for 5 genes in Rhodopseudomonas palustris CGA009

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500 ntTX73_014360 and TX73_014365 are separated by 28 nucleotidesTX73_014365 and TX73_014370 are separated by 144 nucleotidesTX73_014370 and TX73_014375 are separated by 2 nucleotidesTX73_014375 and TX73_014380 overlap by 4 nucleotides TX73_014360: TX73_014360 - septal ring lytic transglycosylase RlpA family protein, at 3,143,258 to 3,144,205 _014360 TX73_014365: TX73_014365 - alpha/beta hydrolase, at 3,144,234 to 3,145,184 _014365 TX73_014370: TX73_014370 - D-alanyl-D-alanine carboxypeptidase, at 3,145,329 to 3,146,570 _014370 TX73_014375: TX73_014375 - dTMP kinase, at 3,146,573 to 3,147,265 _014375 TX73_014380: TX73_014380 - DNA polymerase III subunit delta', at 3,147,262 to 3,148,317 _014380
Group Condition TX73_014360 TX73_014365 TX73_014370 TX73_014375 TX73_014380
carbon source PM with argon and bicarbonate 20 mM and Sodium thiosulfate 50 mM -1.0 +0.1 -0.3 N.D. N.D.
carbon source 4-Aminobutyric (C); anaerobic -0.2 +0.0 -0.7 N.D. N.D.
carbon source PM with argon and bicarbonate 20 mM and Sodium thiosulfate 50 mM -0.4 +0.0 -0.5 N.D. N.D.
carbon source 4-Aminobutyric (C); anaerobic -0.1 +0.0 -0.6 N.D. N.D.
carbon source PM with argon and bicarbonate 20 mM and Sodium thiosulfate 50 mM -0.8 -0.0 +0.2 N.D. N.D.
monoculture OAcsForEtOH (C); monoculture +0.1 -0.1 -0.5 N.D. N.D.
survival starvation expt 2; 14 days; outgrowth in CAAc -0.6 -0.0 +0.1 N.D. N.D.
survival starvation expt 3; 14 days; outgrowth in CAAc -0.5 -0.1 +0.2 N.D. N.D.
survival outgrowth control starvation outgrowth control in CAAc -0.5 -0.0 +0.2 N.D. N.D.
survival starvation expt 2; 3 days; outgrowth in CAAc -0.5 -0.0 +0.2 N.D. N.D.
survival starvation expt 1; 14 days; outgrowth in CAAc -0.5 -0.0 +0.2 N.D. N.D.
carbon source MDC_bicarb with butyrate and Adenine +0.2 -0.0 -0.4 N.D. N.D.
monoculture OAcsForEtOH (C); monoculture +0.1 +0.1 -0.5 N.D. N.D.
survival outgrowth control starvation outgrowth control in CAAc -0.5 +0.2 +0.0 N.D. N.D.
carbon source MDC_bicarb with butyrate and Adenine +0.3 -0.2 -0.3 N.D. N.D.
survival starvation expt 2; 7 days; outgrowth in CAAc -0.4 +0.1 +0.3 N.D. N.D.
carbon source 4-Hydroxybenzoate (C) -0.3 +0.4 -0.0 N.D. N.D.
sulfur source NFM with succinate -0.2 -0.2 +0.4 N.D. N.D.
stress PM_argon75_N2O25 butyrate and Chloride 0.1 mM -0.2 +0.0 +0.4 N.D. N.D.
sulfur source NFM with pyruvate +0.7 -0.2 -0.1 N.D. N.D.
carbon source PM with succinate anaerobic with light +0.2 -0.1 +0.4 N.D. N.D.
stress PM_argon75_N2O25 butyrate and Chloride 0.1 mM +0.4 -0.1 +0.2 N.D. N.D.
carbon source PM with Formate and Sodium bicarbonate anaerobic with light +0.2 -0.0 +0.4 N.D. N.D.
stress PM_N2O butyrate and nitrate 0.1 mM +0.0 +0.0 +0.6 N.D. N.D.
stress PM_N2O butyrate and nitrate 0.1 mM -0.0 +0.1 +0.7 N.D. N.D.
carbon source PM with Formate and Sodium bicarbonate anaerobic with light +0.3 +0.0 +0.4 N.D. N.D.
carbon source dark aerobic PM with succinate and Sodium Formate aerobic in dark +0.3 +0.4 +0.1 N.D. N.D.
sulfur source NFM with pyruvate +0.3 +0.1 +0.4 N.D. N.D.
stress L-Lactate (C) with 10 mM Sodium Chloride +0.6 -0.0 +0.7 N.D. N.D.
carbon source acetate trihydrate and Sodium L-Lactate (C) +0.3 +0.1 +0.8 N.D. N.D.
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