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Protein
Homologs
Fitness for 5 genes in
Rhodopseudomonas palustris CGA009
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
TX73_014265 and TX73_014270 are separated by 130 nucleotides
TX73_014270 and TX73_014275 are separated by 65 nucleotides
TX73_014275 and TX73_014280 are separated by 361 nucleotides
TX73_014280 and TX73_014285 are separated by 87 nucleotides
TX73_014265: TX73_014265 - GNAT family N-acetyltransferase, at 3,126,074 to 3,127,267
_014265
TX73_014270: TX73_014270 - polysaccharide deacetylase family protein, at 3,127,398 to 3,128,450
_014270
TX73_014275: TX73_014275 - DNA starvation/stationary phase protection protein, at 3,128,516 to 3,128,998
_014275
TX73_014280: TX73_014280 - hypothetical protein, at 3,129,360 to 3,130,286
_014280
TX73_014285: TX73_014285 - DUF2842 domain-containing protein, at 3,130,374 to 3,130,586
_014285
Group
Condition
TX73
_014265
TX73
_014270
TX73
_014275
TX73
_014280
TX73
_014285
survival outgrowth control
starvation outgrowth control in CAAc
+0.0
-0.0
+0.1
-0.4
-2.0
stress
PM_N2O butyrate and nitrate 0.1 mM
-0.1
+0.1
-0.1
-1.5
-0.6
stress
PM_N2O butyrate and nitrate 0.1 mM
-0.0
+0.1
+0.0
-1.8
-0.3
stress
PM_argon75_N2O25 with buyrate and 0.1 mM Chloride; in dark
-0.2
+0.0
-0.2
-0.1
-1.5
stress
PM_N2O butyrate and nitrate 0.1 mM
-0.1
+0.1
-0.1
-1.3
-0.2
carbon source
acetate trihydrate and Sodium L-Lactate (C)
+0.0
-0.1
-0.1
-0.8
-0.5
sulfur source
Sulfoacetic sulfur source
+0.3
-0.2
-0.1
-0.2
-1.2
survival
starvation expt 3; 3 days; outgrowth in CAAc
+0.1
-0.0
-0.1
-0.1
-1.3
stress
PM_argon75_N2O25 butyrate and nitrate 0.1 mM
+0.1
-0.0
-0.0
-0.1
-1.2
carbon source
Citraconic (C); anaerobic
+0.1
-0.1
-0.2
+0.1
-1.2
carbon source
L-Malic (C); anaerobic
+0.0
-0.1
-0.1
+0.3
-1.4
carbon source dark aerobic
PM with succinate aerobic in dark
-0.1
+0.1
+0.1
-0.0
-1.2
survival
starvation expt 2; 14 days; outgrowth in CAAc
+0.1
+0.3
+0.1
+0.1
-1.4
sulfur source
Sulfoacetic sulfur source
+0.3
+0.1
+0.0
-0.2
-0.9
stress
PM_N2O with buyrate and 0.1 mM bicarb and 0.1 mM nitrate; in dark
-0.1
+0.2
+0.1
-0.2
-0.8
stress
PM_N2O butyrate and nitrate 0.1 mM
+0.1
+0.1
+0.0
-1.1
+0.2
survival
starvation expt 3; 7 days; outgrowth in CAAc
+0.2
+0.1
+0.2
+0.0
-1.2
sulfur source
sodium isethionate sulfur source
+0.2
+0.3
+0.2
-0.1
-1.0
survival
starvation expt 4; 14 days; outgrowth in CAAc
+0.1
+0.3
+0.2
+0.1
-1.1
carbon source
Pimelic (C); anaerobic
+0.2
+0.1
+0.2
-0.1
-0.8
carbon source
acetate trihydrate and Sodium L-Lactate (C)
-0.0
-0.1
-0.2
-0.5
+0.5
sulfur source
NFM_No_Mo with acetate trihydrate
+0.2
+0.1
+0.4
-0.2
-0.8
carbon source
4-Hydroxybenzoate (C)
+0.2
+0.2
-0.0
+0.2
-0.8
survival
starvation expt 4; 7 days; outgrowth in CAAc
+0.2
+0.3
+0.1
+0.2
-0.9
monoculture
OAcsForEtOH (C); monoculture
+0.9
-0.0
-0.0
-0.0
-0.8
carbon source
PM with argon and butyrate 10 mM and Sodium bicarbonate 10 mM
+0.3
-0.2
+0.0
-0.1
+0.7
carbon source
Azelaic (C); anaerobic
+0.2
+0.1
+0.3
-0.2
+0.6
sulfur source control
sulfur source control
+0.2
+0.1
+0.0
-0.2
+0.9
carbon source
MDC_bicarb with butyrate
+0.4
-0.2
+0.2
-0.2
+0.9
carbon source dark aerobic
PM with succinate and Sodium Formate aerobic in dark
+0.0
+0.1
+0.2
+0.4
+1.1
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