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Protein
Homologs
Fitness for 5 genes in
Rhodopseudomonas palustris CGA009
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
TX73_014010 and TX73_014015 are separated by 13 nucleotides
TX73_014015 and TX73_014020 are separated by 276 nucleotides
TX73_014020 and TX73_014025 are separated by 59 nucleotides
TX73_014025 and TX73_014030 are separated by 106 nucleotides
TX73_014010: TX73_014010 - sodium:proton antiporter, at 3,075,311 to 3,076,741
_014010
TX73_014015: TX73_014015 - hypothetical protein, at 3,076,755 to 3,076,928
_014015
TX73_014020: TX73_014020 - Nramp family divalent metal transporter, at 3,077,205 to 3,078,578
_014020
TX73_014025: TX73_014025 - helix-turn-helix transcriptional regulator, at 3,078,638 to 3,079,459
_014025
TX73_014030: TX73_014030 - FUSC family protein, at 3,079,566 to 3,081,659
_014030
Group
Condition
TX73
_014010
TX73
_014015
TX73
_014020
TX73
_014025
TX73
_014030
carbon source dark aerobic
PM with succinate and Sodium Formate aerobic in dark
N.D.
-0.1
-4.3
+0.2
-0.1
carbon source dark aerobic
PM with succinate and Sodium Formate aerobic in dark
N.D.
-0.1
-4.0
+0.1
+0.0
carbon source
4-Hydroxybenzoate (C)
N.D.
+0.2
-3.3
-0.1
-0.1
carbon source
4-Hydroxybenzoate (C)
N.D.
-0.2
-3.2
-0.0
+0.1
carbon source
PM with argon and bicarbonate 20 mM and Sodium thiosulfate 50 mM
N.D.
-0.1
-3.2
+0.1
+0.0
carbon source
PM with argon and bicarbonate 20 mM and Sodium thiosulfate 50 mM
N.D.
+0.1
-2.8
-0.1
+0.1
carbon source
4-Hydroxybenzoate (C)
N.D.
+0.0
-2.7
+0.0
+0.0
carbon source dark aerobic
PM with butyrate aerobic in dark
N.D.
-0.0
-1.8
-0.0
-0.0
carbon source
PM with argon and bicarbonate 20 mM and Sodium thiosulfate 50 mM
N.D.
+0.0
-1.5
-0.1
-0.1
carbon source
PM with argon and bicarbonate 20 mM and Sodium thiosulfate 50 mM
N.D.
+0.1
-1.7
+0.1
+0.1
carbon source dark aerobic
PM with butyrate aerobic in dark
N.D.
-0.0
-1.4
+0.2
-0.1
carbon source dark aerobic
PM with butyrate aerobic in dark
N.D.
+0.2
-1.5
+0.1
-0.0
carbon source dark aerobic
PM with succinate aerobic in dark
N.D.
-0.2
-1.0
+0.0
-0.1
carbon source dark aerobic
PM with succinate aerobic in dark
N.D.
+0.0
-1.1
-0.0
-0.1
carbon source dark aerobic
PM with succinate aerobic in dark
N.D.
+0.0
-1.1
+0.2
-0.2
carbon source dark aerobic
PM with succinate aerobic in dark
N.D.
-0.1
-1.0
-0.1
+0.1
carbon source
PM with Formate and Sodium bicarbonate anaerobic with light
N.D.
-0.0
-0.9
-0.0
-0.1
carbon source
PM with succinate anaerobic with light
N.D.
-0.2
-0.7
+0.1
-0.1
carbon source dark aerobic
PM with succinate aerobic in dark
N.D.
-0.1
-0.9
+0.1
+0.0
carbon source dark aerobic
PM with succinate aerobic in dark
N.D.
+0.0
-0.8
-0.0
+0.0
carbon source
PM with Formate and Sodium bicarbonate anaerobic with light
N.D.
-0.0
-0.8
+0.1
-0.0
carbon source
PM with argon and bicarbonate 60 mM and Sodium thiosulfate 30 mM
N.D.
+0.1
-0.6
-0.1
+0.0
carbon source
PM with argon and bicarbonate 60 mM and Sodium thiosulfate 30 mM
N.D.
-0.1
-0.5
+0.2
-0.1
carbon source
PM with argon and bicarbonate 60 mM and Sodium thiosulfate 30 mM
N.D.
-0.1
-0.6
+0.2
+0.0
carbon source
MDC_bicarb with butyrate and Adenine
N.D.
+0.3
-0.7
+0.1
-0.1
carbon source
acetate trihydrate and Sodium L-Lactate (C)
N.D.
+0.2
+0.1
+0.1
-0.7
carbon source
MDC_bicarb with butyrate and Adenine
N.D.
+0.3
-0.5
+0.1
+0.0
carbon source
Citraconic (C); anaerobic
N.D.
+0.1
-0.3
+0.2
-0.2
sulfur source
sodium isethionate sulfur source
N.D.
+0.1
-0.3
+0.3
-0.2
sulfur source
NFM with pyruvate
N.D.
-0.4
+0.5
+0.5
-0.2
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