Fitness for 5 genes in Rhodopseudomonas palustris CGA009

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500 ntTX73_013960 and TX73_013965 overlap by 4 nucleotidesTX73_013965 and TX73_013970 are separated by 241 nucleotidesTX73_013970 and TX73_013975 overlap by 4 nucleotidesTX73_013975 and TX73_013980 overlap by 11 nucleotides TX73_013960: TX73_013960 - pyridoxine 5'-phosphate synthase, at 3,066,325 to 3,067,089 _013960 TX73_013965: TX73_013965 - holo-ACP synthase, at 3,067,086 to 3,067,526 _013965 TX73_013970: TX73_013970 - signal peptidase I, at 3,067,768 to 3,068,526 _013970 TX73_013975: TX73_013975 - ribonuclease III, at 3,068,523 to 3,069,341 _013975 TX73_013980: TX73_013980 - GTPase Era, at 3,069,331 to 3,070,257 _013980
Group Condition TX73_013960 TX73_013965 TX73_013970 TX73_013975 TX73_013980
carbon source dark aerobic PM with succinate and Sodium Formate aerobic in dark -3.0 -2.0 N.D. -1.4 N.D.
carbon source acetate trihydrate and Sodium L-Lactate (C) -2.2 -4.0 N.D. -0.2 N.D.
sulfur source Thiamine HCl sulfur source -3.2 -1.5 N.D. -1.2 N.D.
survival starvation expt 3; 7 days; outgrowth in CAAc -3.4 -0.8 N.D. -1.4 N.D.
carbon source PM with argon and bicarbonate 20 mM and Sodium thiosulfate 50 mM -2.5 -2.7 N.D. -0.2 N.D.
carbon source PM with Formate and Sodium bicarbonate anaerobic with light -2.2 -2.9 N.D. -0.1 N.D.
stress PM_N2O butyrate and nitrate 0.1 mM -3.7 -1.0 N.D. -0.5 N.D.
sulfur source Taurine sulfur source -2.8 -1.2 N.D. -1.1 N.D.
stress PM_argon75_N2O25 butyrate and nitrate 0.1 mM -3.7 -0.9 N.D. -0.4 N.D.
carbon source PM with succinate and Sodium Formate anaerobic with light -1.8 -2.8 N.D. -0.3 N.D.
survival starvation expt 4; 14 days; outgrowth in CAAc -3.4 -0.8 N.D. -0.6 N.D.
carbon source Sebacic (C); anaerobic -2.5 -1.8 N.D. -0.5 N.D.
sulfur source NFM_No_Mo_Plus_VCl3 with acetate trihydrate -2.7 -2.0 N.D. -0.1 N.D.
sulfur source Taurine sulfur source -2.9 -1.3 N.D. -0.5 N.D.
carbon source dark aerobic PM with succinate aerobic in dark -2.2 -2.3 N.D. -0.2 N.D.
sulfur source Thiamine HCl sulfur source -3.2 -0.8 N.D. -0.7 N.D.
sulfur source Taurine sulfur source -2.6 -1.2 N.D. -0.7 N.D.
carbon source PM with succinate anaerobic with light -3.5 +0.3 N.D. -1.3 N.D.
stress PM_N2O butyrate and nitrate 0.1 mM -2.9 -1.0 N.D. -0.6 N.D.
survival outgrowth control starvation outgrowth control in CAAc -3.0 -1.1 N.D. -0.4 N.D.
survival starvation expt 3; 3 days; outgrowth in CAAc -3.6 -0.8 N.D. -0.1 N.D.
sulfur source 2-(Methylthio)ethanol sulfur source -2.7 -1.4 N.D. -0.3 N.D.
survival outgrowth control starvation outgrowth control in CAAc -3.5 -0.4 N.D. -0.6 N.D.
stress PM_argon75_N2O25 butyrate and Chloride 0.1 mM -2.9 -1.2 N.D. -0.3 N.D.
survival starvation expt 4; 3 days; outgrowth in CAAc -3.4 -0.7 N.D. -0.2 N.D.
sulfur source control sulfur source control -3.2 +0.2 N.D. -1.1 N.D.
stress L-Lactate (C) with 10 mM Sodium Chloride -2.5 +1.4 N.D. -2.6 N.D.
carbon source PM with succinate anaerobic with light -3.2 -1.2 N.D. +0.7 N.D.
sulfur source sodium isethionate sulfur source -2.2 -2.2 N.D. +0.9 N.D.
survival starvation expt 2; 7 days; outgrowth in CAAc -3.2 +1.0 N.D. -0.6 N.D.
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TX73_013960
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TX73_013965
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TX73_013980
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