Fitness for 5 genes in Rhodopseudomonas palustris CGA009

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500 ntTX73_013380 and TX73_013385 are separated by 185 nucleotidesTX73_013385 and TX73_013390 are separated by 149 nucleotidesTX73_013390 and TX73_013395 are separated by 26 nucleotidesTX73_013395 and TX73_013400 are separated by 81 nucleotides TX73_013380: TX73_013380 - hypothetical protein, at 2,941,075 to 2,941,635 _013380 TX73_013385: TX73_013385 - DNA-3-methyladenine glycosylase, at 2,941,821 to 2,942,441 _013385 TX73_013390: TX73_013390 - lipoyl synthase, at 2,942,591 to 2,943,550 _013390 TX73_013395: TX73_013395 - type II toxin-antitoxin system RatA family toxin, at 2,943,577 to 2,944,050 _013395 TX73_013400: TX73_013400 - CinA family protein, at 2,944,132 to 2,944,752 _013400
Group Condition TX73_013380 TX73_013385 TX73_013390 TX73_013395 TX73_013400
carbon source PM with Formate and Sodium bicarbonate anaerobic with light -0.1 +0.0 N.D. N.D. -1.0
carbon source dark aerobic PM with succinate and Sodium Formate aerobic in dark +0.1 +0.2 N.D. N.D. -1.4
carbon source dark aerobic PM with succinate and Sodium Formate aerobic in dark -0.1 +0.1 N.D. N.D. -1.0
carbon source PM with Formate and Sodium bicarbonate anaerobic with light -0.1 +0.1 N.D. N.D. -0.9
carbon source PM with Formate and Sodium bicarbonate anaerobic with light +0.1 +0.0 N.D. N.D. -0.9
stress L-Lactate (C) with 10 mM Sodium Chloride +0.4 +0.4 N.D. N.D. -1.6
sulfur source 2-(Methylthio)ethanol sulfur source -0.1 -0.1 N.D. N.D. -0.5
stress L-Lactate (C) with 10 mM Sodium Chloride +0.6 +0.4 N.D. N.D. -1.6
carbon source 4-Hydroxybenzoate (C) +0.1 -0.0 N.D. N.D. -0.5
carbon source PM with argon and bicarbonate 60 mM and Sodium thiosulfate 30 mM -0.6 +0.1 N.D. N.D. +0.1
carbon source Sebacic (C); anaerobic -0.7 +0.1 N.D. N.D. +0.2
sulfur source NFM_No_Mo_Plus_VCl3 with acetate trihydrate +0.2 +0.1 N.D. N.D. -0.4
carbon source Citraconic (C); anaerobic -0.3 +0.2 N.D. N.D. -0.0
carbon source Fumarate (C); anaerobic -0.1 -0.2 N.D. N.D. +0.3
carbon source acetate trihydrate and Sodium L-Lactate (C) +0.5 +0.3 N.D. N.D. -0.7
carbon source acetate trihydrate and Sodium L-Lactate (C) +0.3 +0.3 N.D. N.D. -0.3
sulfur source NFM with pyruvate -0.0 +0.4 N.D. N.D. -0.1
carbon source L-Leucine (C); anaerobic -0.3 +0.1 N.D. N.D. +0.5
carbon source MDC_bicarb with butyrate and Adenine +0.3 -0.2 N.D. N.D. +0.2
stress L-Lactate (C) with 10 mM Sodium Chloride +0.6 +0.3 N.D. N.D. -0.6
survival starvation expt 4; 14 days; outgrowth in CAAc -0.2 -0.1 N.D. N.D. +0.7
carbon source acetate trihydrate and Sodium L-Lactate (C) +0.3 +0.3 N.D. N.D. -0.2
survival starvation expt 4; 7 days; outgrowth in CAAc +0.0 -0.1 N.D. N.D. +0.5
survival starvation expt 3; 14 days; outgrowth in CAAc -0.1 -0.0 N.D. N.D. +0.7
survival starvation expt 2; 14 days; outgrowth in CAAc -0.2 +0.1 N.D. N.D. +0.6
survival starvation expt 2; 7 days; outgrowth in CAAc +0.0 +0.1 N.D. N.D. +0.4
carbon source Fumarate (C); anaerobic +0.1 +0.1 N.D. N.D. +0.4
stress PM_N2O with buyrate and 0.1 mM bicarb and 0.1 mM nitrate; in dark +0.2 +0.1 N.D. N.D. +0.3
stress PM_N2O with buyrate and 0.1 mM bicarb and 0.1 mM nitrate; in dark +0.2 +0.1 N.D. N.D. +0.4
carbon source Fumarate (C); anaerobic +0.1 +0.2 N.D. N.D. +0.5
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