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Protein
Homologs
Fitness for 5 genes in
Rhodopseudomonas palustris CGA009
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
TX73_013045 and TX73_013050 are separated by 80 nucleotides
TX73_013050 and TX73_013055 are separated by 380 nucleotides
TX73_013055 and TX73_013060 overlap by 21 nucleotides
TX73_013060 and TX73_013065 are separated by 37 nucleotides
TX73_013045: TX73_013045 - DUF192 domain-containing protein, at 2,866,343 to 2,866,771
_013045
TX73_013050: TX73_013050 - tRNA-Pro, at 2,866,852 to 2,866,928
_013050
TX73_013055: TX73_013055 - hypothetical protein, at 2,867,309 to 2,869,078
_013055
TX73_013060: TX73_013060 - hypothetical protein, at 2,869,058 to 2,869,570
_013060
TX73_013065: TX73_013065 - hypothetical protein, at 2,869,608 to 2,869,997
_013065
Group
Condition
TX73
_013045
TX73
_013050
TX73
_013055
TX73
_013060
TX73
_013065
sulfur source control
sulfur source control
-1.4
N.D.
-0.1
-0.4
-0.2
carbon source
acetate trihydrate and Sodium L-Lactate (C)
-1.0
N.D.
+0.1
-1.0
-0.1
carbon source
PM with argon and bicarbonate 20 mM and Sodium thiosulfate 50 mM
-1.1
N.D.
-0.1
-0.5
-0.2
survival
starvation expt 1; 14 days; outgrowth in CAAc
-1.0
N.D.
-0.0
-0.1
-0.5
survival
starvation expt 2; 7 days; outgrowth in CAAc
-0.5
N.D.
-0.1
-0.4
-0.5
survival
starvation expt 4; 14 days; outgrowth in CAAc
-1.3
N.D.
+0.1
-0.1
-0.0
survival
starvation expt 2; 14 days; outgrowth in CAAc
-0.5
N.D.
-0.0
-0.1
-0.6
survival
starvation expt 4; 3 days; outgrowth in CAAc
-0.6
N.D.
-0.0
-0.1
-0.6
survival outgrowth control
starvation outgrowth control in CAAc
-0.8
N.D.
-0.2
+0.1
-0.4
sulfur source control
sulfur source control
-1.1
N.D.
-0.0
+0.1
-0.2
survival outgrowth control
starvation outgrowth control in CAAc
-0.9
N.D.
+0.0
+0.2
-0.4
survival
starvation expt 1; 7 days; outgrowth in CAAc
-0.5
N.D.
+0.0
+0.2
-0.8
carbon source
MDC_bicarb with butyrate and Adenine
-0.7
N.D.
-0.2
+0.2
-0.3
carbon source
Azelaic (C); anaerobic
-0.7
N.D.
-0.0
+0.3
-0.5
sulfur source
sodium isethionate sulfur source
-0.9
N.D.
-0.3
-0.2
+0.5
carbon source
MDC_bicarb with butyrate and Adenine
+0.3
N.D.
-0.2
-0.5
-0.4
carbon source
acetate trihydrate and Sodium L-Lactate (C)
-0.2
N.D.
+0.0
-1.0
+0.6
carbon source
MDC_bicarb with butyrate
+0.6
N.D.
+0.0
-0.6
-0.4
sulfur source
2-(Methylthio)ethanol sulfur source
-0.8
N.D.
-0.0
+0.2
+0.3
stress
L-Lactate (C) with 10 mM Sodium Chloride
+0.7
N.D.
+0.3
-1.5
+0.4
sulfur source control
sulfur source control
+0.6
N.D.
-0.2
+0.1
-0.5
sulfur source
ethyl methyl sulfide sulfur source
-0.7
N.D.
-0.1
+0.4
+0.4
carbon source
4-Aminobutyric (C); anaerobic
+0.5
N.D.
-0.0
+0.2
-0.6
carbon source dark aerobic
PM with succinate and Sodium Formate aerobic in dark
+0.8
N.D.
-0.1
-0.4
-0.1
carbon source
Fumarate (C); anaerobic
+0.7
N.D.
+0.1
-0.2
-0.3
sulfur source
Dimethylsulfoniopropionate sulfur source
+1.2
N.D.
-0.1
-0.5
-0.2
carbon source dark aerobic
PM with succinate and Sodium Formate aerobic in dark
+1.0
N.D.
-0.1
-0.1
-0.3
stress
L-Lactate (C) with 10 mM Sodium Chloride
+0.9
N.D.
-0.0
-0.3
+0.1
sulfur source
NFM with pyruvate
+1.2
N.D.
+0.1
-0.5
+0.1
sulfur source
NFM with pyruvate
+1.0
N.D.
-0.2
+0.5
-0.3
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