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Protein
Homologs
Fitness for 5 genes in
Rhodopseudomonas palustris CGA009
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
TX73_012845 and TX73_012850 are separated by 45 nucleotides
TX73_012850 and TX73_012855 are separated by 457 nucleotides
TX73_012855 and TX73_012860 are separated by 85 nucleotides
TX73_012860 and TX73_012865 are separated by 146 nucleotides
TX73_012845: TX73_012845 - aquaporin Z, at 2,825,376 to 2,826,098
_012845
TX73_012850: TX73_012850 - DNA topoisomerase IV subunit B, at 2,826,144 to 2,828,195
_012850
TX73_012855: TX73_012855 - DedA family protein, at 2,828,653 to 2,829,183
_012855
TX73_012860: TX73_012860 - MBL fold metallo-hydrolase, at 2,829,269 to 2,830,258
_012860
TX73_012865: TX73_012865 - DUF2087 domain-containing protein, at 2,830,405 to 2,830,950
_012865
Group
Condition
TX73
_012845
TX73
_012850
TX73
_012855
TX73
_012860
TX73
_012865
carbon source
PM with argon and bicarbonate 20 mM and Sodium thiosulfate 50 mM
-0.2
N.D.
-3.7
-0.1
-0.1
carbon source
PM with argon and bicarbonate 20 mM and Sodium thiosulfate 50 mM
+0.1
N.D.
-3.4
-0.1
+0.0
carbon source
PM with argon and bicarbonate 20 mM and Sodium thiosulfate 50 mM
-0.1
N.D.
-2.4
+0.1
+0.0
sulfur source
Taurine sulfur source
-0.3
N.D.
-1.8
+0.1
+0.0
carbon source
PM with argon and bicarbonate 20 mM and Sodium thiosulfate 50 mM
-0.0
N.D.
-2.0
-0.0
+0.0
carbon source
4-Hydroxybenzoate (C)
-0.2
N.D.
-1.8
-0.1
+0.2
sulfur source
Taurine sulfur source
-0.0
N.D.
-1.8
+0.0
-0.0
carbon source
PM with argon and bicarbonate 60 mM and Sodium thiosulfate 30 mM
-0.1
N.D.
-1.6
-0.1
+0.1
carbon source
PM with argon and bicarbonate 60 mM and Sodium thiosulfate 30 mM
-0.1
N.D.
-1.4
-0.0
-0.1
stress
PM_N2O butyrate and nitrate 0.1 mM
-0.0
N.D.
-1.4
+0.0
-0.2
carbon source
PM with argon and bicarbonate 60 mM and Sodium thiosulfate 30 mM
-0.0
N.D.
-1.4
-0.0
-0.1
sulfur source
Taurine sulfur source
-0.2
N.D.
-1.0
+0.0
-0.2
sulfur source
sodium isethionate sulfur source
-0.5
N.D.
-1.0
+0.1
+0.1
carbon source
PM with argon and bicarbonate 60 mM and Sodium thiosulfate 30 mM
-0.1
N.D.
-1.3
+0.0
+0.2
carbon source
acetate trihydrate and Sodium L-Lactate (C)
+0.2
N.D.
-1.0
-0.2
-0.1
carbon source
acetate trihydrate and Sodium L-Lactate (C)
+0.2
N.D.
-0.8
-0.2
+0.3
stress
L-Lactate (C) with 10 mM Sodium Chloride
+0.2
N.D.
+0.7
-0.5
-0.1
carbon source
MDC_bicarb with butyrate
-0.1
N.D.
+1.0
-0.2
-0.1
carbon source dark aerobic
PM with succinate aerobic in dark
-0.1
N.D.
+1.2
-0.0
-0.1
carbon source
PM with argon and butyrate 10 mM and Sodium bicarbonate 10 mM
-0.1
N.D.
+1.2
-0.1
+0.0
carbon source
MDC_bicarb with butyrate and Adenine
-0.0
N.D.
+1.2
-0.1
+0.1
sulfur source
NFM_No_Mo with acetate trihydrate
+0.0
N.D.
+1.0
-0.1
+0.2
carbon source
MDC_bicarb with butyrate
-0.1
N.D.
+1.4
+0.0
-0.1
sulfur source
NFM with pyruvate
-0.4
N.D.
+1.4
+0.1
+0.1
carbon source
MDC_bicarb with butyrate
-0.1
N.D.
+1.4
+0.0
-0.0
carbon source
PM with argon and butyrate 10 mM and Sodium bicarbonate 10 mM
-0.1
N.D.
+1.7
-0.1
-0.1
carbon source
MDC_bicarb with butyrate
+0.0
N.D.
+1.4
-0.1
+0.1
carbon source
PM with argon and butyrate 10 mM and Sodium bicarbonate 10 mM
+0.0
N.D.
+1.7
-0.1
-0.2
carbon source
PM with argon and butyrate 10 mM and Sodium bicarbonate 10 mM
-0.2
N.D.
+2.0
-0.0
-0.1
sulfur source
NFM with pyruvate
-0.2
N.D.
+2.8
-0.1
+0.0
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