Fitness for 5 genes in Rhodopseudomonas palustris CGA009

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500 ntTX73_012685 and TX73_012690 are separated by 6 nucleotidesTX73_012690 and TX73_012695 are separated by 126 nucleotidesTX73_012695 and TX73_012700 are separated by 96 nucleotidesTX73_012700 and TX73_012705 are separated by 194 nucleotides TX73_012685: TX73_012685 - peptide chain release factor 2, at 2,787,172 to 2,788,303 _012685 TX73_012690: TX73_012690 - NAD(P)-dependent oxidoreductase, at 2,788,310 to 2,789,203 _012690 TX73_012695: TX73_012695 - M23 family metallopeptidase, at 2,789,330 to 2,790,700 _012695 TX73_012700: TX73_012700 - peroxiredoxin, at 2,790,797 to 2,791,486 _012700 TX73_012705: TX73_012705 - DUF3971 domain-containing protein, at 2,791,681 to 2,795,403 _012705
Group Condition TX73_012685 TX73_012690 TX73_012695 TX73_012700 TX73_012705
carbon source PM with argon and bicarbonate 20 mM and Sodium thiosulfate 50 mM N.D. -0.1 -0.2 -0.3 N.D.
sulfur source 2-(Methylthio)ethanol sulfur source N.D. -0.2 -0.0 -0.2 N.D.
carbon source PM with argon and bicarbonate 20 mM and Sodium thiosulfate 50 mM N.D. -0.1 -0.2 -0.1 N.D.
sulfur source Taurine sulfur source N.D. -0.1 -0.2 -0.1 N.D.
sulfur source Taurine sulfur source N.D. -0.2 +0.0 -0.2 N.D.
carbon source MDC_bicarb with butyrate N.D. -0.2 +0.0 -0.1 N.D.
sulfur source control sulfur source control N.D. -0.2 -0.2 +0.0 N.D.
stress L-Lactate (C) with 10 mM Sodium Chloride N.D. -0.2 +0.2 -0.2 N.D.
sulfur source NFM_No_Mo with acetate trihydrate N.D. -0.1 +0.1 -0.2 N.D.
carbon source aspen wood chips that have been decomposed by a fungus (C) N.D. +0.1 -0.2 -0.1 N.D.
sulfur source Thiamine HCl sulfur source N.D. +0.1 -0.1 -0.2 N.D.
carbon source 4-Hydroxybenzoate (C) N.D. -0.2 +0.1 -0.1 N.D.
carbon source dark aerobic PM with succinate and Sodium Formate aerobic in dark N.D. -0.2 +0.1 -0.1 N.D.
carbon source PM with succinate anaerobic with light N.D. -0.2 +0.1 -0.1 N.D.
sulfur source NFM with succinate N.D. -0.2 +0.2 -0.1 N.D.
carbon source PM with succinate anaerobic with light N.D. -0.2 +0.2 -0.1 N.D.
survival starvation expt 1; 14 days; outgrowth in CAAc N.D. +0.1 -0.0 -0.2 N.D.
survival starvation expt 2; 3 days; outgrowth in CAAc N.D. +0.1 +0.0 -0.2 N.D.
carbon source Pimelic (C); anaerobic N.D. +0.2 +0.0 -0.3 N.D.
carbon source acetate trihydrate and Sodium L-Lactate (C) N.D. -0.1 +0.2 -0.1 N.D.
stress L-Lactate (C) with 10 mM Sodium Chloride N.D. -0.2 +0.4 -0.1 N.D.
survival outgrowth control starvation outgrowth control in CAAc N.D. +0.1 +0.1 -0.1 N.D.
sulfur source control Dimethyl sulfide sulfur source N.D. +0.0 +0.2 -0.1 N.D.
carbon source PM with Formate and Sodium bicarbonate anaerobic with light N.D. -0.1 +0.2 +0.0 N.D.
carbon source acetate trihydrate and Sodium L-Lactate (C) N.D. -0.1 +0.3 -0.1 N.D.
survival starvation expt 4; 14 days; outgrowth in CAAc N.D. +0.2 +0.1 -0.1 N.D.
survival starvation expt 4; 3 days; outgrowth in CAAc N.D. +0.1 +0.2 -0.1 N.D.
sulfur source NFM with pyruvate N.D. +0.2 +0.3 -0.3 N.D.
monoculture OAcsForEtOH (C); monoculture N.D. +0.1 +0.2 -0.1 N.D.
carbon source acetate trihydrate and Sodium L-Lactate (C) N.D. +0.2 +0.3 +0.1 N.D.
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