Fitness for 5 genes in Rhodopseudomonas palustris CGA009

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500 ntTX73_012145 and TX73_012150 are separated by 273 nucleotidesTX73_012150 and TX73_012155 are separated by 164 nucleotidesTX73_012155 and TX73_012160 are separated by 280 nucleotidesTX73_012160 and TX73_012165 are separated by 42 nucleotides TX73_012145: TX73_012145 - PLP-dependent transferase, at 2,662,642 to 2,663,835 _012145 TX73_012150: TX73_012150 - PLP-dependent transferase, at 2,664,109 to 2,665,410 _012150 TX73_012155: TX73_012155 - Lrp/AsnC family transcriptional regulator, at 2,665,575 to 2,666,063 _012155 TX73_012160: TX73_012160 - cupin domain-containing protein, at 2,666,344 to 2,666,841 _012160 TX73_012165: TX73_012165 - AAA family ATPase, at 2,666,884 to 2,667,759 _012165
Group Condition TX73_012145 TX73_012150 TX73_012155 TX73_012160 TX73_012165
sulfur source Dimethylsulfoniopropionate sulfur source -0.3 -0.1 -0.9 +0.2 -0.7
sulfur source Dimethylsulfoniopropionate sulfur source -0.3 -0.0 -1.2 +0.0 -0.3
sulfur source control Dimethyl sulfide sulfur source +0.3 +0.0 -1.3 -0.4 -0.1
sulfur source Dimethylsulfoniopropionate sulfur source +0.1 +0.1 -1.3 +0.0 -0.2
sulfur source control Dimethyl sulfide sulfur source +0.3 +0.4 -1.6 +0.3 -0.5
sulfur source control Dimethyl sulfide sulfur source +0.2 +0.2 -1.4 +0.4 -0.4
stress PM_N2O butyrate and nitrate 0.1 mM -0.4 -0.5 +0.4 -0.1 -0.3
survival starvation expt 1; 7 days; outgrowth in CAAc -0.5 -0.5 +0.4 +0.0 -0.2
sulfur source Thiamine HCl sulfur source -0.1 +0.3 -1.0 +0.2 -0.2
carbon source 4-Hydroxybenzoate (C) -0.1 -0.2 -1.0 +0.6 +0.1
carbon source Butyric Acid (C); anaerobic -0.4 -0.3 +0.7 -0.8 +0.1
sulfur source Thiamine HCl sulfur source +0.3 +0.4 -1.3 +0.1 -0.2
sulfur source ethyl methyl sulfide sulfur source +0.2 +0.3 -0.7 -0.2 -0.3
sulfur source NFM with pyruvate -0.4 +0.0 +1.7 -2.0 +0.1
carbon source acetate trihydrate and Sodium L-Lactate (C) -1.0 -0.4 +0.8 +0.4 -0.3
carbon source PM with succinate anaerobic with light +0.3 +0.2 -0.5 -0.4 +0.1
carbon source acetate trihydrate and Sodium L-Lactate (C) -0.3 -0.4 +0.6 +0.2 -0.2
sulfur source Thiamine HCl sulfur source +0.3 +0.2 -0.8 +0.2 -0.1
carbon source dark aerobic PM with butyrate aerobic in dark +0.1 +0.2 +0.3 -0.7 +0.4
stress L-Lactate (C) with 10 mM Sodium Chloride -0.8 -0.2 +1.4 +0.0 -0.2
sulfur source control sulfur source control -0.4 +0.4 +0.6 -0.4 +0.0
sulfur source sodium isethionate sulfur source +0.4 -0.3 -0.5 +0.2 +0.5
sulfur source ethyl methyl sulfide sulfur source +0.2 +0.3 -0.4 +0.5 -0.2
sulfur source Sulfoacetic sulfur source -0.1 +0.1 +1.0 -0.2 -0.2
carbon source acetate trihydrate and Sodium L-Lactate (C) -0.5 -0.5 +1.6 +0.4 -0.2
carbon source dark aerobic PM with succinate aerobic in dark +0.3 +0.5 +0.1 -0.3 +0.5
stress L-Lactate (C) with 10 mM Sodium Chloride -0.5 +0.1 +1.2 +0.2 +0.1
carbon source dark aerobic PM with butyrate aerobic in dark +0.2 -0.2 -0.2 +0.3 +0.9
sulfur source 2-(Methylthio)ethanol sulfur source +0.3 +0.1 +1.0 +0.1 +0.1
carbon source PM with argon and bicarbonate 60 mM and Sodium thiosulfate 30 mM +0.1 +0.3 +0.3 +0.6 +0.5
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TX73_012145
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TX73_012150
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TX73_012165
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