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Protein
Homologs
Fitness for 5 genes in
Rhodopseudomonas palustris CGA009
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
TX73_011765 and TX73_011770 are separated by 185 nucleotides
TX73_011770 and TX73_011775 overlap by 8 nucleotides
TX73_011775 and TX73_011780 are separated by 38 nucleotides
TX73_011780 and TX73_011785 are separated by 1 nucleotides
TX73_011765: TX73_011765 - hypothetical protein, at 2,576,425 to 2,576,730
_011765
TX73_011770: TX73_011770 - ABC transporter ATP-binding protein, at 2,576,916 to 2,577,671
_011770
TX73_011775: TX73_011775 - ABC transporter ATP-binding protein, at 2,577,664 to 2,578,410
_011775
TX73_011780: TX73_011780 - branched-chain amino acid ABC transporter permease, at 2,578,449 to 2,579,324
_011780
TX73_011785: TX73_011785 - branched-chain amino acid ABC transporter permease, at 2,579,326 to 2,580,297
_011785
Group
Condition
TX73
_011765
TX73
_011770
TX73
_011775
TX73
_011780
TX73
_011785
carbon source dark aerobic
PM with succinate and Sodium Formate aerobic in dark
-0.2
-1.8
-1.5
-1.7
-1.7
carbon source dark aerobic
PM with succinate and Sodium Formate aerobic in dark
+0.1
-1.4
-1.4
-1.8
-1.5
carbon source dark aerobic
PM with succinate aerobic in dark
-0.0
-1.2
-1.3
-2.0
-1.3
carbon source dark aerobic
PM with succinate aerobic in dark
-0.1
-1.4
-1.5
-1.1
-1.3
carbon source dark aerobic
PM with succinate aerobic in dark
-0.1
-1.3
-1.4
-1.2
-1.3
carbon source dark aerobic
PM with succinate aerobic in dark
-0.1
-1.1
-1.2
-1.4
-1.3
carbon source dark aerobic
PM with succinate aerobic in dark
+0.3
-1.2
-1.1
-1.2
-1.3
carbon source dark aerobic
PM with succinate aerobic in dark
+0.2
-1.2
-1.2
-0.9
-1.1
stress
L-Lactate (C) with 10 mM Sodium Chloride
-0.4
-0.4
-0.4
-0.5
-0.5
carbon source
L-Leucine (C); anaerobic
+0.0
-0.6
-0.3
-0.5
-0.4
stress
L-Lactate (C) with 10 mM Sodium Chloride
+0.3
-0.5
-0.3
-0.8
-0.2
carbon source
PM with succinate anaerobic with light
-0.2
-0.3
-0.3
-0.1
-0.6
sulfur source
NFM with succinate
+0.0
-0.3
-0.3
-0.4
-0.4
sulfur source
NFM with succinate
+0.0
-0.3
-0.3
-0.4
-0.3
sulfur source
NFM with succinate
-0.1
-0.2
-0.5
-0.3
-0.2
sulfur source
NFM with pyruvate
-0.4
-0.2
-0.2
-0.2
-0.2
carbon source
PM with succinate anaerobic with light
-0.3
-0.3
-0.1
-0.3
-0.1
stress
L-Lactate (C) with 10 mM Sodium Chloride
+0.1
-0.2
-0.3
-0.3
-0.4
sulfur source
Taurine sulfur source
-0.0
-0.3
-0.2
-0.1
-0.2
sulfur source
Taurine sulfur source
-0.2
-0.2
-0.2
-0.2
-0.1
carbon source
PM with succinate anaerobic with light
-0.1
-0.3
-0.3
+0.1
-0.0
carbon source
4-Hydroxybenzoate (C)
-0.1
-0.0
+0.1
-0.3
-0.3
sulfur source control
sulfur source control
-0.3
-0.3
+0.1
-0.3
+0.1
carbon source
MDC_bicarb with butyrate and Adenine
+0.1
-0.3
-0.3
+0.1
-0.0
carbon source
MDC_bicarb with butyrate and Adenine
+0.2
-0.1
-0.3
-0.2
+0.1
sulfur source
sodium isethionate sulfur source
+0.2
-0.3
+0.1
-0.2
-0.2
carbon source
MDC_bicarb with butyrate and Adenine
-0.1
-0.1
-0.4
+0.4
-0.0
sulfur source
Dimethylsulfoniopropionate sulfur source
+0.4
-0.1
-0.2
-0.2
+0.0
carbon source
acetate trihydrate and Sodium L-Lactate (C)
+0.4
-0.0
-0.3
-0.2
+0.1
stress
PM_argon75_N2O25 butyrate and Chloride 0.1 mM
+0.1
+0.2
+0.2
+0.1
-0.1
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