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Protein
Homologs
Fitness for 5 genes in
Rhodopseudomonas palustris CGA009
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
TX73_011730 and TX73_011735 are separated by 75 nucleotides
TX73_011735 and TX73_011740 are separated by 47 nucleotides
TX73_011740 and TX73_011745 are separated by 187 nucleotides
TX73_011745 and TX73_011750 are separated by 113 nucleotides
TX73_011730: TX73_011730 - hypothetical protein, at 2,569,677 to 2,570,120
_011730
TX73_011735: TX73_011735 - flavin reductase family protein, at 2,570,196 to 2,570,756
_011735
TX73_011740: TX73_011740 - NAD(P)/FAD-dependent oxidoreductase, at 2,570,804 to 2,572,606
_011740
TX73_011745: TX73_011745 - hypothetical protein, at 2,572,794 to 2,573,765
_011745
TX73_011750: TX73_011750 - pyruvate kinase, at 2,573,879 to 2,575,357
_011750
Group
Condition
TX73
_011730
TX73
_011735
TX73
_011740
TX73
_011745
TX73
_011750
carbon source
PM with succinate and Sodium Formate anaerobic with light
-0.2
-0.3
+0.1
-0.1
-0.1
carbon source
PM with argon and bicarbonate 20 mM and Sodium thiosulfate 50 mM
+0.1
-0.3
-0.1
-0.2
-0.1
sulfur source
sodium isethionate sulfur source
-0.2
-0.1
-0.2
-0.1
-0.0
carbon source
PM with succinate and Sodium Formate anaerobic with light
-0.4
+0.0
+0.0
-0.0
-0.2
sulfur source
NFM with succinate
-0.3
-0.1
+0.1
-0.0
-0.2
carbon source
Fumarate (C); anaerobic
-0.6
+0.1
-0.0
+0.1
-0.1
carbon source dark aerobic
PM with butyrate aerobic in dark
-0.4
-0.1
-0.1
+0.1
-0.1
stress
L-Lactate (C) with 10 mM Sodium Chloride
-0.0
-0.7
+0.3
-0.0
+0.0
carbon source dark aerobic
PM with succinate aerobic in dark
-0.2
-0.1
+0.1
-0.1
-0.1
sulfur source control
sulfur source control
-0.1
-0.3
-0.1
-0.1
+0.1
carbon source
aspen wood chips that have been decomposed by a fungus (C)
-0.5
-0.1
+0.1
-0.0
+0.0
carbon source
acetate trihydrate and Sodium L-Lactate (C)
+0.1
-0.6
+0.0
+0.1
-0.1
sulfur source
NFM with pyruvate
+0.0
-0.3
+0.2
-0.2
-0.2
stress
L-Lactate (C) with 10 mM Sodium Chloride
-0.4
-0.2
+0.1
+0.2
-0.0
stress
PM_argon75_N2O25 butyrate and Chloride 0.1 mM
-0.3
+0.3
-0.1
-0.0
-0.1
sulfur source
NFM_No_Mo with acetate trihydrate
-0.2
-0.2
+0.1
+0.0
-0.1
carbon source
acetate trihydrate and Sodium L-Lactate (C)
-0.1
-0.4
+0.1
-0.1
+0.2
carbon source
PM with argon and bicarbonate 20 mM and Sodium thiosulfate 50 mM
+0.2
-0.1
-0.2
-0.2
-0.1
carbon source
PM with succinate anaerobic with light
-0.2
-0.1
+0.1
+0.2
-0.2
carbon source
PM with succinate and Sodium Formate anaerobic with light
-0.2
-0.2
+0.2
+0.2
-0.0
survival
starvation expt 1; 3 days; outgrowth in CAAc
+0.2
-0.3
+0.2
-0.1
-0.1
carbon source
aspen wood chips that have been decomposed by a fungus (C)
-0.3
+0.3
+0.2
-0.2
-0.0
sulfur source
NFM with pyruvate
+0.3
-0.4
+0.1
-0.1
+0.2
sulfur source
Sulfoacetic sulfur source
+0.1
-0.4
+0.2
+0.0
+0.1
sulfur source
sodium isethionate sulfur source
-0.3
+0.1
+0.1
+0.2
+0.0
carbon source
MDC_bicarb with butyrate and Adenine
+0.5
-0.1
+0.1
-0.1
-0.1
stress
PM_argon75_N2O25 with buyrate and 0.1 mM Chloride; in dark
+0.4
-0.0
+0.1
+0.0
-0.1
sulfur source control
Dimethyl sulfide sulfur source
+0.3
+0.0
+0.2
+0.0
+0.1
carbon source
acetate trihydrate and Sodium L-Lactate (C)
+0.3
-0.0
+0.1
+0.2
+0.0
stress
PM_argon75_N2O25 butyrate and Chloride 0.1 mM
+0.4
+0.2
+0.1
-0.0
+0.1
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