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Protein
Homologs
Fitness for 5 genes in
Rhodopseudomonas palustris CGA009
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
TX73_011695 and TX73_011700 are separated by 278 nucleotides
TX73_011700 and TX73_011705 are separated by 157 nucleotides
TX73_011705 and TX73_011710 are separated by 177 nucleotides
TX73_011710 and TX73_011715 overlap by 1 nucleotides
TX73_011695: TX73_011695 - GMP synthase (glutamine-hydrolyzing), at 2,564,480 to 2,564,823
_011695
TX73_011700: TX73_011700 - transcriptional regulator, at 2,565,102 to 2,565,289
_011700
TX73_011705: TX73_011705 - sodium/glutamate symporter, at 2,565,447 to 2,566,643
_011705
TX73_011710: TX73_011710 - PIN domain-containing protein, at 2,566,821 to 2,567,249
_011710
TX73_011715: TX73_011715 - hypothetical protein, at 2,567,249 to 2,567,548
_011715
Group
Condition
TX73
_011695
TX73
_011700
TX73
_011705
TX73
_011710
TX73
_011715
carbon source
PM with succinate anaerobic with light
-0.5
-0.8
-0.1
-0.2
-0.5
carbon source
PM with Formate and Sodium bicarbonate anaerobic with light
-0.3
-0.4
-0.2
-0.1
-0.4
carbon source
L-Malic (C); anaerobic
-0.5
+0.3
-0.0
-0.2
-0.9
carbon source dark aerobic
PM with butyrate aerobic in dark
-0.2
-0.8
+0.1
-0.1
-0.2
carbon source
PM with argon and bicarbonate 60 mM and Sodium thiosulfate 30 mM
-0.0
-0.1
-0.3
+0.0
-0.8
carbon source
Citraconic (C); anaerobic
-0.3
+0.1
-0.2
-0.1
-0.6
sulfur source
NFM_No_Mo with acetate trihydrate
-0.2
+0.2
-0.0
-0.3
-0.6
carbon source
Sebacic (C); anaerobic
-0.2
+0.3
+0.0
-0.3
-0.7
carbon source
PM with Formate and Sodium bicarbonate anaerobic with light
-0.2
-0.3
-0.2
-0.3
+0.2
carbon source
Pimelic (C); anaerobic
-0.2
+0.4
-0.0
-0.2
-0.7
carbon source
acetate trihydrate and Sodium L-Lactate (C)
-0.0
+0.1
+0.2
-1.1
+0.1
sulfur source
ethyl methyl sulfide sulfur source
-0.3
+0.2
-0.1
-0.0
-0.6
carbon source dark aerobic
PM with succinate and Sodium Formate aerobic in dark
-0.5
-0.5
-0.1
+0.3
+0.3
sulfur source
ethyl methyl sulfide sulfur source
-0.3
+0.3
-0.0
-0.2
-0.3
carbon source
PM with succinate anaerobic with light
-0.2
+0.2
-0.1
+0.1
-0.5
survival
starvation expt 1; 7 days; outgrowth in CAAc
-0.3
+0.4
-0.1
-0.3
-0.2
sulfur source
NFM with pyruvate
+0.1
+0.0
+0.3
+0.1
-0.9
carbon source
aspen wood chips that have been decomposed by a fungus (C)
-0.5
-0.4
+0.0
+0.2
+0.2
carbon source
PM with argon and bicarbonate 20 mM and Sodium thiosulfate 50 mM
-0.2
+0.0
-0.1
-0.4
+0.5
carbon source
MDC_bicarb with butyrate and Adenine
-0.3
-0.3
-0.1
+0.0
+0.5
carbon source
PM with succinate and Sodium Formate anaerobic with light
-0.3
+0.4
-0.0
-0.4
+0.4
sulfur source
2-(Methylthio)ethanol sulfur source
+0.2
+0.5
-0.0
+0.1
-0.6
carbon source dark aerobic
PM with butyrate aerobic in dark
-0.1
-0.2
-0.2
-0.2
+0.8
stress
L-Lactate (C) with 10 mM Sodium Chloride
+0.0
+1.2
+0.1
-0.2
-0.5
sulfur source
NFM with pyruvate
-0.3
-0.0
-0.0
+0.3
+0.6
carbon source
acetate trihydrate and Sodium L-Lactate (C)
+0.1
+0.6
+0.3
-0.1
-0.3
survival
starvation expt 3; 7 days; outgrowth in CAAc
-0.0
+0.4
-0.0
-0.4
+0.6
stress
L-Lactate (C) with 10 mM Sodium Chloride
+0.5
+0.1
+0.2
-0.5
+0.3
stress
L-Lactate (C) with 10 mM Sodium Chloride
+0.3
+1.3
+0.1
-0.4
-0.6
carbon source
acetate trihydrate and Sodium L-Lactate (C)
-0.3
+0.8
+0.2
+0.1
+0.3
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