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Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodopseudomonas palustris CGA009
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
TX73_011615 and TX73_011620 are separated by 330 nucleotides
TX73_011620 and TX73_011625 are separated by 13 nucleotides
TX73_011625 and TX73_011630 are separated by 87 nucleotides
TX73_011630 and TX73_011635 are separated by 86 nucleotides
TX73_011615: TX73_011615 - DUF2493 domain-containing protein, at 2,543,966 to 2,544,898
_011615
TX73_011620: TX73_011620 - toprim domain-containing protein, at 2,545,229 to 2,546,266
_011620
TX73_011625: TX73_011625 - strawberry notch family protein, at 2,546,280 to 2,550,635
_011625
TX73_011630: TX73_011630 - DUF6117 family protein, at 2,550,723 to 2,550,965
_011630
TX73_011635: TX73_011635 - ParB N-terminal domain-containing protein, at 2,551,052 to 2,553,157
_011635
Group
Condition
TX73
_011615
TX73
_011620
TX73
_011625
TX73
_011630
TX73
_011635
carbon source dark aerobic
PM with butyrate aerobic in dark
-0.4
-0.2
-0.3
-0.6
-0.2
carbon source dark aerobic
PM with succinate and Sodium Formate aerobic in dark
-0.3
-0.3
-0.3
-0.3
-0.3
carbon source dark aerobic
PM with butyrate aerobic in dark
-0.3
-0.3
-0.3
-0.5
-0.2
carbon source
MDC_bicarb with butyrate
-0.2
-0.3
-0.3
-0.4
-0.3
carbon source dark aerobic
PM with succinate aerobic in dark
-0.4
-0.3
-0.2
-0.5
-0.2
carbon source
PM with argon and bicarbonate 20 mM and Sodium thiosulfate 50 mM
-0.3
-0.3
-0.3
-0.5
-0.2
carbon source dark aerobic
PM with succinate aerobic in dark
-0.3
-0.3
-0.3
-0.4
-0.3
sulfur source
Taurine sulfur source
-0.2
-0.2
-0.2
-0.5
-0.2
carbon source dark aerobic
PM with succinate aerobic in dark
-0.4
-0.3
-0.3
-0.1
-0.2
carbon source
PM with succinate and Sodium Formate anaerobic with light
-0.3
-0.2
-0.2
-0.2
-0.3
carbon source dark aerobic
PM with succinate aerobic in dark
-0.2
-0.3
-0.3
-0.4
-0.2
carbon source dark aerobic
PM with succinate and Sodium Formate aerobic in dark
-0.2
-0.4
-0.3
-0.1
-0.3
carbon source
PM with succinate anaerobic with light
-0.3
-0.2
-0.3
-0.1
-0.2
carbon source
PM with Formate and Sodium bicarbonate anaerobic with light
-0.2
-0.2
-0.3
-0.2
-0.3
carbon source
PM with Formate and Sodium bicarbonate anaerobic with light
-0.2
-0.2
-0.2
-0.4
-0.2
carbon source
MDC_bicarb with butyrate
-0.2
-0.2
-0.2
-0.4
-0.2
carbon source
MDC_bicarb with butyrate
-0.3
-0.4
-0.2
-0.1
-0.2
carbon source
PM with argon and bicarbonate 60 mM and Sodium thiosulfate 30 mM
-0.3
-0.1
-0.3
-0.4
-0.1
sulfur source
NFM with succinate
-0.3
-0.2
-0.2
-0.3
-0.1
carbon source
PM with succinate anaerobic with light
-0.2
-0.3
-0.3
-0.1
-0.2
carbon source
PM with argon and bicarbonate 20 mM and Sodium thiosulfate 50 mM
-0.2
-0.3
-0.2
-0.2
-0.2
carbon source dark aerobic
PM with succinate aerobic in dark
-0.3
-0.3
-0.3
+0.1
-0.3
carbon source
PM with succinate and Sodium Formate anaerobic with light
-0.2
-0.2
-0.3
-0.1
-0.2
carbon source
PM with Formate and Sodium bicarbonate anaerobic with light
-0.3
-0.3
-0.2
-0.1
-0.2
sulfur source
Thiamine HCl sulfur source
-0.2
-0.2
-0.2
-0.3
-0.2
sulfur source
Thiamine HCl sulfur source
-0.3
-0.2
-0.1
-0.3
-0.1
carbon source
PM with succinate and Sodium Formate anaerobic with light
-0.2
-0.2
-0.3
-0.1
-0.2
sulfur source
NFM with succinate
-0.2
-0.3
-0.2
-0.2
-0.1
sulfur source
Taurine sulfur source
-0.2
-0.2
-0.1
-0.5
-0.0
carbon source
PM with argon and bicarbonate 20 mM and Sodium thiosulfate 50 mM
-0.2
-0.3
-0.2
+0.1
-0.2
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