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Protein
Homologs
Fitness for 5 genes in
Rhodopseudomonas palustris CGA009
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
TX73_011460 and TX73_011465 are separated by 13 nucleotides
TX73_011465 and TX73_011470 are separated by 144 nucleotides
TX73_011470 and TX73_011475 overlap by 34 nucleotides
TX73_011475 and TX73_011480 are separated by 4 nucleotides
TX73_011460: TX73_011460 - DUF1156 domain-containing protein, at 2,514,285 to 2,517,119
_011460
TX73_011465: TX73_011465 - DUF499 domain-containing protein, at 2,517,133 to 2,520,432
_011465
TX73_011470: TX73_011470 - LysR family transcriptional regulator, at 2,520,577 to 2,521,467
_011470
TX73_011475: TX73_011475 - DUF2274 domain-containing protein, at 2,521,434 to 2,521,682
_011475
TX73_011480: TX73_011480 - TrbI/VirB10 family protein, at 2,521,687 to 2,522,931
_011480
Group
Condition
TX73
_011460
TX73
_011465
TX73
_011470
TX73
_011475
TX73
_011480
sulfur source
NFM with pyruvate
-0.7
-1.0
-0.2
-0.3
-0.2
sulfur source
NFM with pyruvate
-0.3
-0.7
-0.3
-0.3
-0.2
carbon source dark aerobic
PM with succinate and Sodium Formate aerobic in dark
-0.3
-0.6
-0.2
-0.4
-0.3
carbon source dark aerobic
PM with succinate and Sodium Formate aerobic in dark
-0.4
-0.5
-0.1
-0.5
-0.2
carbon source
MDC_bicarb with butyrate
-0.0
-0.7
-0.3
-0.6
-0.0
carbon source dark aerobic
PM with butyrate aerobic in dark
-0.2
-0.5
+0.1
-0.7
-0.3
carbon source dark aerobic
PM with butyrate aerobic in dark
-0.3
-0.6
-0.0
-0.4
-0.2
carbon source
MDC_bicarb with butyrate
-0.4
-0.7
-0.1
-0.1
-0.2
carbon source
PM with argon and bicarbonate 20 mM and Sodium thiosulfate 50 mM
-0.1
-0.3
-0.2
-0.5
-0.3
carbon source dark aerobic
PM with butyrate aerobic in dark
-0.3
-0.3
-0.2
-0.3
-0.2
sulfur source
Thiamine HCl sulfur source
-0.2
-0.4
-0.2
-0.4
-0.2
carbon source
MDC_bicarb with butyrate and Adenine
-0.1
-0.2
-0.3
-0.5
-0.2
carbon source
MDC_bicarb with butyrate
-0.2
-0.5
-0.2
-0.1
-0.2
carbon source
PM with succinate and Sodium Formate anaerobic with light
-0.3
-0.3
-0.2
-0.1
-0.3
carbon source
PM with Formate and Sodium bicarbonate anaerobic with light
+0.0
-0.2
-0.2
-0.6
-0.3
carbon source
PM with succinate anaerobic with light
-0.0
-0.2
-0.3
-0.5
-0.2
sulfur source control
sulfur source control
-0.3
-0.1
-0.1
-0.5
-0.1
carbon source
PM with argon and bicarbonate 20 mM and Sodium thiosulfate 50 mM
-0.1
-0.2
-0.2
-0.3
-0.4
carbon source
MDC_bicarb with butyrate
-0.0
-0.5
-0.2
-0.3
-0.1
carbon source dark aerobic
PM with succinate aerobic in dark
-0.3
-0.3
-0.1
-0.2
-0.3
carbon source
PM with argon and bicarbonate 60 mM and Sodium thiosulfate 30 mM
-0.1
-0.3
-0.2
-0.4
-0.1
sulfur source
Taurine sulfur source
-0.2
-0.3
-0.1
-0.4
-0.1
carbon source dark aerobic
PM with succinate aerobic in dark
+0.0
-0.4
-0.3
-0.2
-0.2
carbon source dark aerobic
PM with succinate aerobic in dark
+0.1
-0.4
-0.1
-0.4
-0.3
carbon source
4-Hydroxybenzoate (C)
+0.2
-0.4
-0.1
-0.6
-0.0
sulfur source
sodium isethionate sulfur source
-0.2
-0.4
+0.2
-0.5
+0.1
sulfur source
NFM with succinate
-0.2
-0.3
-0.2
+0.3
-0.2
carbon source
MDC_bicarb with butyrate and Adenine
+0.3
-0.6
+0.0
-0.2
-0.2
stress
L-Lactate (C) with 10 mM Sodium Chloride
+0.2
-0.6
+0.1
+0.1
-0.1
stress
L-Lactate (C) with 10 mM Sodium Chloride
+0.2
-0.6
+0.3
+0.4
-0.1
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