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Protein
Homologs
Fitness for 5 genes in
Rhodopseudomonas palustris CGA009
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
TX73_010895 and TX73_010900 are separated by 42 nucleotides
TX73_010900 and TX73_010905 are separated by 106 nucleotides
TX73_010905 and TX73_010910 overlap by 22 nucleotides
TX73_010910 and TX73_010915 are separated by 202 nucleotides
TX73_010895: TX73_010895 - ABC transporter ATP-binding protein, at 2,378,796 to 2,379,683
_010895
TX73_010900: TX73_010900 - cyanase, at 2,379,726 to 2,380,214
_010900
TX73_010905: TX73_010905 - DUF2023 family protein, at 2,380,321 to 2,380,737
_010905
TX73_010910: TX73_010910 - flavodoxin FldA, at 2,380,716 to 2,381,198
_010910
TX73_010915: TX73_010915 - heme ABC transporter ATP-binding protein, at 2,381,401 to 2,382,207
_010915
Group
Condition
TX73
_010895
TX73
_010900
TX73
_010905
TX73
_010910
TX73
_010915
stress
L-Lactate (C) with 10 mM Sodium Chloride
+0.2
-0.5
-0.2
-4.0
+0.7
sulfur source
NFM with pyruvate
-0.2
-0.0
-1.1
-0.8
-0.5
carbon source
MDC_bicarb with butyrate
+0.1
-0.3
-0.4
-0.9
+0.0
sulfur source
NFM_No_Mo_Plus_VCl3 with acetate trihydrate
+0.1
+0.1
-0.2
-1.1
-0.1
sulfur source
NFM with pyruvate
+0.2
-1.0
+0.4
-0.5
-0.2
stress
L-Lactate (C) with 10 mM Sodium Chloride
-0.2
-0.7
+0.7
-1.1
+0.3
carbon source
4-Hydroxybenzoate (C)
-0.6
-0.3
+0.5
-0.1
-0.2
carbon source
acetate trihydrate and Sodium L-Lactate (C)
+0.4
-1.1
+0.5
-0.9
+0.5
stress
Benzoate (C), sodium fluoride stress
+0.0
+0.3
+0.1
-1.0
+0.2
carbon source
acetate trihydrate and Sodium L-Lactate (C)
+0.4
-0.1
-0.1
-0.9
+0.5
carbon source
PM with argon and bicarbonate 60 mM and Sodium thiosulfate 30 mM
+0.2
-0.6
+0.1
+0.6
+0.0
stress
L-Lactate (C) with 10 mM Sodium Chloride
+0.7
-0.8
+0.9
-0.7
+0.3
sulfur source
Dimethylsulfoniopropionate sulfur source
+0.3
-0.3
+0.5
-0.3
+0.3
carbon source
PM with succinate and Sodium Formate anaerobic with light
+0.3
-0.6
+0.4
+0.2
+0.2
carbon source
PM with argon and butyrate 10 mM and Sodium bicarbonate 10 mM
+0.0
+0.2
-0.5
+0.8
+0.0
stress
PM_argon75_N2O25 butyrate and Chloride 0.1 mM
-0.0
-0.6
+0.8
+0.3
+0.1
sulfur source
Sulfoacetic sulfur source
-0.1
-0.4
+0.3
+1.0
-0.1
stress
PM_argon75_N2O25 butyrate and Chloride 0.1 mM
-0.4
+0.3
+0.4
+0.4
+0.1
sulfur source
sodium isethionate sulfur source
+0.3
+0.0
-0.2
+1.1
+0.0
sulfur source
Sulfoacetic sulfur source
+0.1
+0.4
-0.2
+0.6
+0.3
carbon source
PM with succinate anaerobic with light
+0.3
-0.0
+0.5
+1.0
-0.4
carbon source dark aerobic
PM with succinate aerobic in dark
+0.2
-0.2
+0.2
+0.9
+0.2
sulfur source
Sulfoacetic sulfur source
-0.0
+0.1
+0.5
+1.1
-0.1
sulfur source
2-(Methylthio)ethanol sulfur source
+0.2
+0.1
+0.2
+0.9
+0.1
carbon source dark aerobic
PM with butyrate aerobic in dark
+0.2
-0.2
+0.5
+0.9
+0.1
carbon source dark aerobic
PM with succinate aerobic in dark
+0.3
-0.0
+0.4
+0.6
+0.2
sulfur source
NFM with succinate
+0.2
+0.1
+0.4
+0.8
+0.1
sulfur source
Dimethylsulfoniopropionate sulfur source
+0.2
+0.1
+0.6
+0.6
+0.2
sulfur source
Taurine sulfur source
+0.1
+0.2
+0.1
+1.3
+0.1
sulfur source
sodium isethionate sulfur source
-0.0
+0.7
+0.2
+0.7
+0.3
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