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Protein
Homologs
Fitness for 5 genes in
Rhodopseudomonas palustris CGA009
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
TX73_010815 and TX73_010820 are separated by 327 nucleotides
TX73_010820 and TX73_010825 are separated by 24 nucleotides
TX73_010825 and TX73_010830 overlap by 4 nucleotides
TX73_010830 and TX73_010835 are separated by 1 nucleotides
TX73_010815: TX73_010815 - MFS transporter, at 2,357,597 to 2,359,246
_010815
TX73_010820: TX73_010820 - hydrolase, at 2,359,574 to 2,360,224
_010820
TX73_010825: TX73_010825 - XapX domain-containing protein, at 2,360,249 to 2,360,539
_010825
TX73_010830: TX73_010830 - amidohydrolase, at 2,360,536 to 2,362,416
_010830
TX73_010835: TX73_010835 - DoxX family protein, at 2,362,418 to 2,362,843
_010835
Group
Condition
TX73
_010815
TX73
_010820
TX73
_010825
TX73
_010830
TX73
_010835
carbon source
Azelaic (C); anaerobic
-0.0
-0.2
-2.8
-0.0
-0.1
sulfur source
NFM with pyruvate
+0.1
+0.1
-3.0
-0.0
+0.2
carbon source
PM with argon and bicarbonate 60 mM and Sodium thiosulfate 30 mM
+0.0
-0.1
-1.5
+0.1
-0.6
carbon source
PM with succinate anaerobic with light
-0.0
-0.4
-1.9
+0.2
+0.0
carbon source
aspen wood chips that have been decomposed by a fungus (C)
+0.1
-0.1
-1.6
+0.1
-0.3
carbon source
acetate trihydrate and Sodium L-Lactate (C)
-0.3
-0.3
-1.0
+0.3
-0.3
survival
starvation expt 4; 7 days; outgrowth in CAAc
+0.1
-0.1
-1.7
+0.2
-0.1
carbon source
acetate trihydrate (C)
+0.1
+0.2
-1.3
-0.1
-0.1
carbon source
PM with argon and bicarbonate 60 mM and Sodium thiosulfate 30 mM
+0.1
-0.3
-1.2
+0.2
+0.1
stress
PM_argon75_N2O25 butyrate and Chloride 0.1 mM
+0.2
+0.1
-1.6
+0.1
+0.1
carbon source
acetate trihydrate and Sodium L-Lactate (C)
-0.2
-0.5
-0.7
+0.5
-0.0
carbon source
PM with succinate and Sodium Formate anaerobic with light
+0.2
-0.1
-1.2
+0.2
+0.2
survival outgrowth control
starvation outgrowth control in CAAc
+0.0
+0.5
-1.0
+0.1
-0.3
survival
starvation expt 2; 14 days; outgrowth in CAAc
+0.1
-0.3
-0.8
+0.1
+0.3
carbon source dark aerobic
PM with succinate aerobic in dark
+0.3
+0.1
-1.0
+0.1
+0.1
sulfur source
Thiamine HCl sulfur source
+0.1
+0.1
-1.0
+0.3
+0.3
carbon source dark aerobic
PM with succinate aerobic in dark
+0.3
+0.1
-1.0
+0.3
+0.1
carbon source dark aerobic
PM with butyrate aerobic in dark
+0.2
+0.4
-1.4
+0.2
+0.5
carbon source
PM with succinate and Sodium Formate anaerobic with light
+0.2
+0.4
-0.7
+0.3
+0.2
carbon source
PM with succinate anaerobic with light
+0.3
+0.2
-0.7
+0.2
+0.3
stress
L-Lactate (C) with 10 mM Sodium Chloride
-0.0
-0.1
+1.1
+0.1
-0.2
sulfur source
sodium isethionate sulfur source
+0.4
+0.5
-0.3
+0.5
-0.3
stress
L-Lactate (C) with 10 mM Sodium Chloride
-0.5
+0.3
+1.5
+0.1
-0.6
carbon source
MDC_bicarb with butyrate and Adenine
+0.1
+0.3
+1.1
+0.0
-0.3
stress
L-Lactate (C) with 10 mM Sodium Chloride
-0.6
+0.3
+1.2
+0.3
+0.1
sulfur source
NFM with pyruvate
-0.2
+0.7
+0.5
+0.1
+0.6
stress
PM_N2O with buyrate and 0.1 mM bicarb and 0.1 mM nitrate; in dark
+0.2
+0.1
+1.2
+0.1
+0.1
coculture
dpurH coculture with Glucose and NaCl and NH4Cl
+0.2
+0.5
+1.3
-0.0
-0.0
sulfur source
NFM with succinate
+0.1
+0.4
+0.8
+0.1
+0.4
stress
PM_argon75_N2O25 butyrate and Chloride 0.1 mM
+0.1
+0.2
+1.4
+0.2
+0.0
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