Fitness for 5 genes in Rhodopseudomonas palustris CGA009

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500 ntTX73_010815 and TX73_010820 are separated by 327 nucleotidesTX73_010820 and TX73_010825 are separated by 24 nucleotidesTX73_010825 and TX73_010830 overlap by 4 nucleotidesTX73_010830 and TX73_010835 are separated by 1 nucleotides TX73_010815: TX73_010815 - MFS transporter, at 2,357,597 to 2,359,246 _010815 TX73_010820: TX73_010820 - hydrolase, at 2,359,574 to 2,360,224 _010820 TX73_010825: TX73_010825 - XapX domain-containing protein, at 2,360,249 to 2,360,539 _010825 TX73_010830: TX73_010830 - amidohydrolase, at 2,360,536 to 2,362,416 _010830 TX73_010835: TX73_010835 - DoxX family protein, at 2,362,418 to 2,362,843 _010835
Group Condition TX73_010815 TX73_010820 TX73_010825 TX73_010830 TX73_010835
carbon source Azelaic (C); anaerobic -0.0 -0.2 -2.8 -0.0 -0.1
sulfur source NFM with pyruvate +0.1 +0.1 -3.0 -0.0 +0.2
carbon source PM with argon and bicarbonate 60 mM and Sodium thiosulfate 30 mM +0.0 -0.1 -1.5 +0.1 -0.6
carbon source PM with succinate anaerobic with light -0.0 -0.4 -1.9 +0.2 +0.0
carbon source aspen wood chips that have been decomposed by a fungus (C) +0.1 -0.1 -1.6 +0.1 -0.3
carbon source acetate trihydrate and Sodium L-Lactate (C) -0.3 -0.3 -1.0 +0.3 -0.3
survival starvation expt 4; 7 days; outgrowth in CAAc +0.1 -0.1 -1.7 +0.2 -0.1
carbon source acetate trihydrate (C) +0.1 +0.2 -1.3 -0.1 -0.1
carbon source PM with argon and bicarbonate 60 mM and Sodium thiosulfate 30 mM +0.1 -0.3 -1.2 +0.2 +0.1
stress PM_argon75_N2O25 butyrate and Chloride 0.1 mM +0.2 +0.1 -1.6 +0.1 +0.1
carbon source acetate trihydrate and Sodium L-Lactate (C) -0.2 -0.5 -0.7 +0.5 -0.0
carbon source PM with succinate and Sodium Formate anaerobic with light +0.2 -0.1 -1.2 +0.2 +0.2
survival outgrowth control starvation outgrowth control in CAAc +0.0 +0.5 -1.0 +0.1 -0.3
survival starvation expt 2; 14 days; outgrowth in CAAc +0.1 -0.3 -0.8 +0.1 +0.3
carbon source dark aerobic PM with succinate aerobic in dark +0.3 +0.1 -1.0 +0.1 +0.1
sulfur source Thiamine HCl sulfur source +0.1 +0.1 -1.0 +0.3 +0.3
carbon source dark aerobic PM with succinate aerobic in dark +0.3 +0.1 -1.0 +0.3 +0.1
carbon source dark aerobic PM with butyrate aerobic in dark +0.2 +0.4 -1.4 +0.2 +0.5
carbon source PM with succinate and Sodium Formate anaerobic with light +0.2 +0.4 -0.7 +0.3 +0.2
carbon source PM with succinate anaerobic with light +0.3 +0.2 -0.7 +0.2 +0.3
stress L-Lactate (C) with 10 mM Sodium Chloride -0.0 -0.1 +1.1 +0.1 -0.2
sulfur source sodium isethionate sulfur source +0.4 +0.5 -0.3 +0.5 -0.3
stress L-Lactate (C) with 10 mM Sodium Chloride -0.5 +0.3 +1.5 +0.1 -0.6
carbon source MDC_bicarb with butyrate and Adenine +0.1 +0.3 +1.1 +0.0 -0.3
stress L-Lactate (C) with 10 mM Sodium Chloride -0.6 +0.3 +1.2 +0.3 +0.1
sulfur source NFM with pyruvate -0.2 +0.7 +0.5 +0.1 +0.6
stress PM_N2O with buyrate and 0.1 mM bicarb and 0.1 mM nitrate; in dark +0.2 +0.1 +1.2 +0.1 +0.1
coculture dpurH coculture with Glucose and NaCl and NH4Cl +0.2 +0.5 +1.3 -0.0 -0.0
sulfur source NFM with succinate +0.1 +0.4 +0.8 +0.1 +0.4
stress PM_argon75_N2O25 butyrate and Chloride 0.1 mM +0.1 +0.2 +1.4 +0.2 +0.0
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