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Protein
Homologs
Fitness for 5 genes in
Rhodopseudomonas palustris CGA009
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
TX73_010110 and TX73_010115 are separated by 1 nucleotides
TX73_010115 and TX73_010120 are separated by 31 nucleotides
TX73_010120 and TX73_010125 are separated by 58 nucleotides
TX73_010125 and TX73_010130 are separated by 25 nucleotides
TX73_010110: TX73_010110 - efflux RND transporter permease subunit, at 2,205,716 to 2,208,766
_010110
TX73_010115: TX73_010115 - hypothetical protein, at 2,208,768 to 2,209,049
_010115
TX73_010120: TX73_010120 - patatin-like phospholipase family protein, at 2,209,081 to 2,210,271
_010120
TX73_010125: TX73_010125 - hypothetical protein, at 2,210,330 to 2,210,887
_010125
TX73_010130: TX73_010130 - adenylate/guanylate cyclase domain-containing protein, at 2,210,913 to 2,212,901
_010130
Group
Condition
TX73
_010110
TX73
_010115
TX73
_010120
TX73
_010125
TX73
_010130
stress
L-Lactate (C) with 10 mM Sodium Chloride
+0.2
-1.1
+0.2
-0.3
-0.1
carbon source
4-Hydroxybenzoate (C)
-0.4
-0.2
-0.0
-0.3
-0.0
carbon source
Butyric Acid (C); anaerobic
-0.1
-0.3
-0.2
-0.3
-0.1
carbon source
PM with succinate anaerobic with light
-0.3
-0.2
-0.1
-0.2
-0.2
carbon source
PM with argon and bicarbonate 60 mM and Sodium thiosulfate 30 mM
-0.2
-0.1
-0.3
-0.2
-0.1
carbon source
Fumarate (C); anaerobic
+0.0
-0.5
-0.1
-0.4
+0.1
carbon source
MDC_bicarb with butyrate and Adenine
-0.0
-0.7
-0.2
-0.0
+0.0
sulfur source
ethyl methyl sulfide sulfur source
-0.1
-0.6
-0.0
+0.1
-0.3
sulfur source
NFM with pyruvate
+0.1
-0.0
-0.1
-0.5
-0.2
carbon source
PM with Formate and Sodium bicarbonate anaerobic with light
-0.2
-0.4
-0.2
-0.2
+0.3
sulfur source control
sulfur source control
+0.1
-0.9
-0.1
+0.3
-0.1
sulfur source
Thiamine HCl sulfur source
-0.0
-0.9
-0.0
+0.3
-0.1
survival
starvation expt 3; 14 days; outgrowth in CAAc
-0.4
-0.1
-0.1
-0.3
+0.2
survival outgrowth control
starvation outgrowth control in CAAc
-0.1
-0.6
+0.0
-0.2
+0.1
stress
PM_argon75_N2O25 butyrate and nitrate 0.1 mM
+0.0
-0.6
+0.1
+0.0
-0.1
carbon source
aspen wood chips that have been decomposed by a fungus (C)
-0.1
-0.5
-0.1
+0.1
+0.1
carbon source
PM with argon and bicarbonate 60 mM and Sodium thiosulfate 30 mM
-0.1
-0.3
+0.1
+0.2
-0.3
carbon source dark aerobic
PM with succinate aerobic in dark
-0.0
+0.2
-0.2
-0.2
-0.2
carbon source
4-Hydroxybenzoate (C)
+0.3
-0.1
-0.2
-0.2
+0.0
survival
starvation expt 4; 14 days; outgrowth in CAAc
-0.3
+0.3
+0.0
-0.2
+0.1
stress
PM_argon75_N2O25 with buyrate and 0.1 mM Chloride; in dark
-0.0
-0.5
+0.0
+0.1
+0.3
carbon source
acetate trihydrate and Sodium L-Lactate (C)
+0.4
-0.1
+0.1
-0.4
+0.2
carbon source
acetate trihydrate and Sodium L-Lactate (C)
+0.0
+0.5
+0.1
-0.3
-0.2
sulfur source
Dimethylsulfoniopropionate sulfur source
+0.3
+0.4
-0.2
-0.1
-0.2
stress
L-Lactate (C) with 10 mM Sodium Chloride
+0.3
-0.2
+0.2
-0.2
+0.2
carbon source dark aerobic
PM with butyrate aerobic in dark
-0.2
+0.6
-0.0
+0.1
-0.2
sulfur source
NFM with pyruvate
+0.4
+0.6
-0.0
-0.6
+0.0
carbon source
PM with argon and butyrate 10 mM and Sodium bicarbonate 10 mM
-0.2
+0.6
-0.2
+0.2
-0.0
sulfur source
sodium isethionate sulfur source
-0.1
+0.0
+0.2
+0.5
+0.2
stress
L-Lactate (C) with 10 mM Sodium Chloride
+0.4
-0.5
+0.5
+0.2
+0.2
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