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Protein
Homologs
Fitness for 5 genes in
Rhodopseudomonas palustris CGA009
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
TX73_009865 and TX73_009870 are separated by 111 nucleotides
TX73_009870 and TX73_009875 are separated by 15 nucleotides
TX73_009875 and TX73_009880 are separated by 96 nucleotides
TX73_009880 and TX73_009885 are separated by 222 nucleotides
TX73_009865: TX73_009865 - 3TM-type holin, at 2,147,308 to 2,147,880
_009865
TX73_009870: TX73_009870 - response regulator transcription factor, at 2,147,992 to 2,148,666
_009870
TX73_009875: TX73_009875 - sensor histidine kinase, at 2,148,682 to 2,150,073
_009875
TX73_009880: TX73_009880 - RT0821/Lpp0805 family surface protein, at 2,150,170 to 2,150,634
_009880
TX73_009885: TX73_009885 - hypothetical protein, at 2,150,857 to 2,152,260
_009885
Group
Condition
TX73
_009865
TX73
_009870
TX73
_009875
TX73
_009880
TX73
_009885
carbon source dark aerobic
PM with succinate and Sodium Formate aerobic in dark
-0.0
-0.8
-0.3
-0.4
-0.2
carbon source dark aerobic
PM with succinate and Sodium Formate aerobic in dark
+0.1
-0.6
-0.4
-0.3
-0.3
sulfur source
NFM with pyruvate
-0.2
-0.7
-0.5
+0.0
-0.0
sulfur source
Dimethylsulfoniopropionate sulfur source
-0.1
-0.3
-0.0
-0.6
-0.1
carbon source
MDC_bicarb with butyrate and Adenine
+0.1
-0.6
-0.1
-0.5
+0.0
sulfur source
NFM_No_Mo with acetate trihydrate
-0.0
-0.7
-0.1
-0.2
+0.1
carbon source
4-Aminobutyric (C); anaerobic
-0.3
-0.4
-0.1
-0.0
+0.1
stress
PM_N2O with buyrate and 0.1 mM bicarb and 0.1 mM nitrate; in dark
+0.1
-0.1
-0.4
-0.2
-0.2
carbon source
PM with argon and bicarbonate 20 mM and Sodium thiosulfate 50 mM
+0.1
+0.0
-0.9
+0.1
-0.1
carbon source
4-Aminobutyric (C); anaerobic
-0.1
-0.5
-0.1
-0.2
+0.1
sulfur source
NFM_No_Mo_Plus_VCl3 with acetate trihydrate
+0.2
-0.3
-0.0
-0.4
-0.1
carbon source
PM with argon and bicarbonate 20 mM and Sodium thiosulfate 50 mM
-0.2
+0.0
-0.7
+0.2
+0.1
carbon source
PM with argon and bicarbonate 20 mM and Sodium thiosulfate 50 mM
+0.1
+0.2
-0.8
-0.1
+0.0
carbon source
PM with argon and bicarbonate 20 mM and Sodium thiosulfate 50 mM
-0.1
+0.0
-0.6
+0.2
-0.0
carbon source
PM with Formate and Sodium bicarbonate anaerobic with light
+0.2
+0.2
-0.3
-0.3
-0.0
carbon source
4-Hydroxybenzoate (C)
-0.1
+0.7
-0.0
-0.5
-0.2
stress
L-Lactate (C) with 10 mM Sodium Chloride
+0.0
+0.4
+0.1
-0.5
-0.1
sulfur source
Taurine sulfur source
+0.1
+0.4
+0.0
-0.2
-0.3
carbon source dark aerobic
PM with succinate aerobic in dark
+0.6
-0.1
+0.1
-0.4
-0.1
sulfur source
Dimethylsulfoniopropionate sulfur source
+0.1
+0.2
-0.1
-0.4
+0.2
carbon source
PM with succinate and Sodium Formate anaerobic with light
+0.2
+0.4
-0.0
-0.4
-0.1
sulfur source
Thiamine HCl sulfur source
+0.0
+0.4
+0.1
-0.2
-0.2
carbon source
PM with succinate anaerobic with light
-0.1
+0.4
+0.2
-0.3
+0.0
sulfur source
Taurine sulfur source
-0.0
+0.4
+0.2
-0.1
-0.2
carbon source
PM with argon and bicarbonate 60 mM and Sodium thiosulfate 30 mM
+0.2
-0.1
+0.3
-0.2
+0.2
stress
PM_argon75_N2O25 butyrate and Chloride 0.1 mM
-0.3
+0.4
+0.1
+0.1
+0.3
sulfur source
2-(Methylthio)ethanol sulfur source
-0.0
+0.6
+0.3
-0.1
-0.1
sulfur source
2-(Methylthio)ethanol sulfur source
+0.1
+0.6
+0.2
-0.1
+0.0
sulfur source
sodium isethionate sulfur source
+0.4
+0.4
+0.3
-0.2
-0.0
sulfur source
Taurine sulfur source
+0.3
+0.6
+0.2
-0.2
-0.0
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