Fitness for 5 genes in Rhodopseudomonas palustris CGA009

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 175 experiments or choose conditions or try the comparative fitness browser

500 ntTX73_009595 and TX73_009600 overlap by 4 nucleotidesTX73_009600 and TX73_009605 are separated by 43 nucleotidesTX73_009605 and TX73_009610 are separated by 270 nucleotidesTX73_009610 and TX73_009615 are separated by 54 nucleotides TX73_009595: TX73_009595 - DUF1254 domain-containing protein, at 2,093,992 to 2,094,558 _009595 TX73_009600: TX73_009600 - DUF1214 domain-containing protein, at 2,094,555 to 2,095,133 _009600 TX73_009605: TX73_009605 - PBP1A family penicillin-binding protein, at 2,095,177 to 2,097,450 _009605 TX73_009610: TX73_009610 - YcgN family cysteine cluster protein, at 2,097,721 to 2,098,233 _009610 TX73_009615: TX73_009615 - sulfite exporter TauE/SafE family protein, at 2,098,288 to 2,099,031 _009615
Group Condition TX73_009595 TX73_009600 TX73_009605 TX73_009610 TX73_009615
survival starvation expt 1; 14 days; outgrowth in CAAc N.D. N.D. N.D. -0.4 -0.2
stress L-Lactate (C) with 10 mM Sodium Chloride N.D. N.D. N.D. -0.1 -0.4
stress L-Lactate (C) with 10 mM Sodium Chloride N.D. N.D. N.D. -0.1 -0.4
carbon source aspen wood chips that have been decomposed by a fungus (C) N.D. N.D. N.D. +0.1 -0.5
stress PM_argon75_N2O25 butyrate and nitrate 0.1 mM N.D. N.D. N.D. -0.0 -0.4
survival outgrowth control starvation outgrowth control in CAAc N.D. N.D. N.D. -0.2 -0.3
carbon source Fumarate (C); anaerobic N.D. N.D. N.D. +0.0 -0.4
carbon source 4-Hydroxybenzoate (C) N.D. N.D. N.D. -0.5 +0.1
carbon source PM with argon and bicarbonate 20 mM and Sodium thiosulfate 50 mM N.D. N.D. N.D. -0.4 +0.1
carbon source PM with argon and bicarbonate 60 mM and Sodium thiosulfate 30 mM N.D. N.D. N.D. -0.4 +0.2
carbon source dark aerobic PM with succinate and Sodium Formate aerobic in dark N.D. N.D. N.D. -0.3 +0.1
carbon source PM with argon and bicarbonate 60 mM and Sodium thiosulfate 30 mM N.D. N.D. N.D. -0.3 +0.2
stress PM_argon75_N2O25 butyrate and Chloride 0.1 mM N.D. N.D. N.D. -0.3 +0.2
carbon source PM with argon and butyrate 10 mM and Sodium bicarbonate 10 mM N.D. N.D. N.D. -0.3 +0.2
carbon source PM with argon and bicarbonate 20 mM and Sodium thiosulfate 50 mM N.D. N.D. N.D. -0.3 +0.2
carbon source PM with argon and butyrate 10 mM and Sodium bicarbonate 10 mM N.D. N.D. N.D. -0.2 +0.2
stress PM_argon75_N2O25 butyrate and nitrate 0.1 mM N.D. N.D. N.D. -0.2 +0.3
sulfur source Thiamine HCl sulfur source N.D. N.D. N.D. -0.2 +0.3
carbon source MDC_bicarb with butyrate and Adenine N.D. N.D. N.D. -0.1 +0.3
sulfur source Thiamine HCl sulfur source N.D. N.D. N.D. -0.2 +0.3
carbon source L-Leucine (C); anaerobic N.D. N.D. N.D. -0.2 +0.4
carbon source PM with Formate and Sodium bicarbonate anaerobic with light N.D. N.D. N.D. -0.2 +0.4
sulfur source Taurine sulfur source N.D. N.D. N.D. -0.1 +0.4
carbon source dark aerobic PM with butyrate aerobic in dark N.D. N.D. N.D. -0.1 +0.4
sulfur source 2-(Methylthio)ethanol sulfur source N.D. N.D. N.D. +0.1 +0.3
sulfur source sodium isethionate sulfur source N.D. N.D. N.D. -0.1 +0.5
carbon source dark aerobic PM with succinate aerobic in dark N.D. N.D. N.D. +0.1 +0.4
carbon source MDC_bicarb with butyrate and Adenine N.D. N.D. N.D. +0.2 +0.3
sulfur source NFM with pyruvate N.D. N.D. N.D. +0.3 +0.3
stress PM_N2O butyrate and nitrate 0.1 mM N.D. N.D. N.D. +0.3 +0.3
remove
TX73_009595
plot		 remove
TX73_009600
plot		 remove
TX73_009605		 remove
TX73_009610
plot		 remove
TX73_009615
plot