Fitness for 5 genes in Rhodopseudomonas palustris CGA009

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 175 experiments or choose conditions or try the comparative fitness browser

500 ntTX73_009210 and TX73_009215 overlap by 4 nucleotidesTX73_009215 and TX73_009220 are separated by 5 nucleotidesTX73_009220 and TX73_009225 are separated by 164 nucleotidesTX73_009225 and TX73_009230 are separated by 137 nucleotides TX73_009210: TX73_009210 - ABC transporter ATP-binding protein, at 2,007,082 to 2,007,801 _009210 TX73_009215: TX73_009215 - branched-chain amino acid ABC transporter ATP-binding protein/permease, at 2,007,798 to 2,009,570 _009215 TX73_009220: TX73_009220 - branched-chain amino acid ABC transporter permease, at 2,009,576 to 2,010,616 _009220 TX73_009225: TX73_009225 - MarR family transcriptional regulator, at 2,010,781 to 2,011,299 _009225 TX73_009230: TX73_009230 - cation:proton antiporter, at 2,011,437 to 2,013,167 _009230
Group Condition TX73_009210 TX73_009215 TX73_009220 TX73_009225 TX73_009230
carbon source Citraconic (C); anaerobic -0.1 -0.1 -0.0 -0.7 -0.1
carbon source dark aerobic PM with succinate and Sodium Formate aerobic in dark -0.2 -0.0 +0.3 -0.7 -0.1
carbon source Citraconic (C); anaerobic -0.3 -0.1 +0.1 -0.5 +0.0
carbon source Citraconic (C); anaerobic -0.1 -0.0 +0.2 -0.8 +0.1
carbon source PM with Formate and Sodium bicarbonate anaerobic with light -0.3 +0.0 +0.2 -0.7 +0.2
carbon source dark aerobic PM with succinate and Sodium Formate aerobic in dark -0.0 +0.2 +0.1 -0.8 -0.0
survival starvation expt 2; 3 days; outgrowth in CAAc -0.4 +0.0 +0.1 -0.4 +0.2
stress PM_argon75_N2O25 with buyrate and 0.1 mM Chloride; in dark -0.2 -0.1 -0.2 -0.1 +0.3
carbon source PM with Formate and Sodium bicarbonate anaerobic with light -0.3 -0.0 +0.2 -0.5 +0.2
carbon source PM with Formate and Sodium bicarbonate anaerobic with light +0.2 +0.1 +0.2 -0.9 +0.1
survival starvation expt 4; 14 days; outgrowth in CAAc -0.0 +0.0 +0.1 -0.6 +0.2
sulfur source control sulfur source control -0.1 +0.2 +0.1 -0.6 +0.1
carbon source PM with argon and bicarbonate 20 mM and Sodium thiosulfate 50 mM +0.1 -0.2 +0.3 -0.4 +0.0
survival starvation expt 2; 7 days; outgrowth in CAAc -0.2 +0.0 +0.2 -0.3 +0.2
sulfur source Thiamine HCl sulfur source -0.1 -0.2 +0.3 -0.2 +0.1
carbon source PM with argon and bicarbonate 20 mM and Sodium thiosulfate 50 mM -0.2 +0.3 +0.2 -0.3 +0.0
carbon source acetate trihydrate and Sodium L-Lactate (C) -0.1 +0.1 +0.5 -0.3 -0.1
carbon source PM with argon and butyrate 10 mM and Sodium bicarbonate 10 mM +0.3 +0.2 +0.1 -0.4 +0.0
sulfur source NFM with succinate +0.1 +0.1 +0.4 -0.5 +0.0
carbon source PM with succinate anaerobic with light +0.1 -0.0 +0.2 -0.4 +0.2
carbon source MDC_bicarb with butyrate and Adenine -0.1 +0.1 -0.3 +0.1 +0.4
carbon source dark aerobic PM with succinate aerobic in dark -0.2 +0.2 +0.4 -0.2 -0.0
carbon source 4-Hydroxybenzoate (C) -0.3 -0.2 +0.1 +1.0 -0.2
carbon source MDC_bicarb with butyrate and Adenine +0.3 +0.1 +0.2 -0.2 +0.2
stress Benzoate (C), sodium fluoride stress -0.1 -0.0 +0.3 +0.5 +0.1
carbon source 4-Hydroxybenzoate (C) -0.1 -0.2 -0.0 +1.1 -0.1
stress PM_argon75_N2O25 butyrate and Chloride 0.1 mM +0.3 +0.3 +0.1 -0.0 +0.3
sulfur source NFM with pyruvate +0.3 -0.0 +0.3 +0.9 -0.3
sulfur source NFM with pyruvate +0.6 -0.2 +0.3 +0.8 -0.0
carbon source 4-Hydroxybenzoate (C) -0.0 +0.1 -0.1 +2.0 -0.1
remove
TX73_009210
plot		 remove
TX73_009215
plot		 remove
TX73_009220		 remove
TX73_009225
plot		 remove
TX73_009230
plot