Fitness for 5 genes in Rhodopseudomonas palustris CGA009

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500 ntTX73_008815 and TX73_008820 are separated by 11 nucleotidesTX73_008820 and TX73_008825 are separated by 250 nucleotidesTX73_008825 and TX73_008830 are separated by 273 nucleotidesTX73_008830 and TX73_008835 are separated by 206 nucleotides TX73_008815: TX73_008815 - cyclic nucleotide-binding domain-containing protein, at 1,913,942 to 1,914,616 _008815 TX73_008820: TX73_008820 - hypothetical protein, at 1,914,628 to 1,915,512 _008820 TX73_008825: TX73_008825 - DUF3307 domain-containing protein, at 1,915,763 to 1,916,167 _008825 TX73_008830: TX73_008830 - diguanylate cyclase, at 1,916,441 to 1,918,651 _008830 TX73_008835: TX73_008835 - hypothetical protein, at 1,918,858 to 1,919,244 _008835
Group Condition TX73_008815 TX73_008820 TX73_008825 TX73_008830 TX73_008835
stress PM_argon75_N2O25 with buyrate and 0.1 mM Chloride; in dark -0.3 -0.2 N.D. -0.1 +0.0
carbon source dark aerobic PM with butyrate aerobic in dark -0.3 +0.1 N.D. -0.1 -0.1
carbon source PM with argon and bicarbonate 20 mM and Sodium thiosulfate 50 mM -0.1 +0.1 N.D. +0.2 -0.2
sulfur source sodium isethionate sulfur source -0.2 -0.1 N.D. +0.1 +0.2
carbon source dark aerobic PM with butyrate aerobic in dark -0.2 +0.3 N.D. -0.2 +0.1
stress L-Lactate (C) with 10 mM Sodium Chloride +0.1 +0.3 N.D. +0.2 -0.4
survival starvation expt 1; 7 days; outgrowth in CAAc +0.2 +0.2 N.D. -0.1 -0.1
carbon source PM with succinate anaerobic with light -0.1 +0.2 N.D. +0.1 +0.2
carbon source 4-Hydroxybenzoate (C) +0.2 -0.2 N.D. +0.1 +0.3
survival starvation expt 3; 14 days; outgrowth in CAAc +0.3 +0.2 N.D. +0.0 -0.1
carbon source MDC_bicarb with butyrate and Adenine +0.2 +0.3 N.D. +0.0 -0.2
carbon source MDC_bicarb with butyrate and Adenine +0.1 +0.5 N.D. -0.0 -0.1
carbon source PM with argon and butyrate 10 mM and Sodium bicarbonate 10 mM +0.2 +0.1 N.D. -0.1 +0.3
stress L-Lactate (C) with 10 mM Sodium Chloride -0.0 +0.4 N.D. +0.3 -0.1
stress PM_argon75_N2O25 butyrate and Chloride 0.1 mM +0.5 +0.2 N.D. -0.1 -0.1
sulfur source Thiamine HCl sulfur source +0.3 +0.3 N.D. +0.0 -0.0
sulfur source sodium isethionate sulfur source +0.2 +0.2 N.D. +0.0 +0.1
carbon source acetate trihydrate and Sodium L-Lactate (C) +0.4 +0.1 N.D. +0.2 -0.1
carbon source dark aerobic PM with succinate aerobic in dark +0.5 +0.1 N.D. +0.0 -0.0
sulfur source 2-(Methylthio)ethanol sulfur source +0.2 +0.2 N.D. +0.2 +0.1
sulfur source Dimethylsulfoniopropionate sulfur source +0.3 +0.2 N.D. +0.1 +0.0
carbon source MDC_bicarb with butyrate and Adenine +0.4 +0.3 N.D. +0.1 -0.1
sulfur source ethyl methyl sulfide sulfur source +0.1 +0.3 N.D. +0.1 +0.2
sulfur source Thiamine HCl sulfur source +0.3 +0.3 N.D. +0.1 -0.0
carbon source MDC_bicarb with butyrate and Adenine +0.5 +0.3 N.D. -0.1 +0.0
sulfur source Thiamine HCl sulfur source +0.4 +0.3 N.D. +0.1 +0.0
sulfur source Thiamine HCl sulfur source +0.2 +0.3 N.D. +0.1 +0.3
carbon source PM with Formate and Sodium bicarbonate anaerobic with light +0.4 +0.7 N.D. -0.2 +0.0
carbon source PM with Formate and Sodium bicarbonate anaerobic with light +0.4 +0.5 N.D. +0.0 +0.2
carbon source PM with Formate and Sodium bicarbonate anaerobic with light +0.6 +0.6 N.D. -0.1 +0.1
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TX73_008815
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TX73_008835
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