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Protein
Homologs
Fitness for 5 genes in
Rhodopseudomonas palustris CGA009
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
TX73_008760 and TX73_008765 are separated by 278 nucleotides
TX73_008765 and TX73_008770 are separated by 131 nucleotides
TX73_008770 and TX73_008775 are separated by 456 nucleotides
TX73_008775 and TX73_008780 are separated by 223 nucleotides
TX73_008760: TX73_008760 - acyl-CoA synthetase, at 1,899,532 to 1,901,088
_008760
TX73_008765: TX73_008765 - acetyl-CoA C-acetyltransferase, at 1,901,367 to 1,902,542
_008765
TX73_008770: TX73_008770 - TetR family transcriptional regulator, at 1,902,674 to 1,903,351
_008770
TX73_008775: TX73_008775 - SDR family NAD(P)-dependent oxidoreductase, at 1,903,808 to 1,904,566
_008775
TX73_008780: TX73_008780 - enoyl-CoA hydratase/isomerase family protein, at 1,904,790 to 1,905,596
_008780
Group
Condition
TX73
_008760
TX73
_008765
TX73
_008770
TX73
_008775
TX73
_008780
carbon source
4-Hydroxybenzoate (C)
+0.3
-0.0
-2.4
-0.2
-0.1
carbon source
4-Hydroxybenzoate (C)
+0.1
+0.2
-2.0
-0.0
+0.1
carbon source
4-Hydroxybenzoate (C)
-0.1
+0.1
-1.2
+0.0
-0.0
sulfur source
sodium isethionate sulfur source
+0.2
-0.1
-0.6
+0.0
+0.1
sulfur source
Taurine sulfur source
+0.1
+0.1
-0.5
-0.1
+0.1
stress
L-Lactate (C) with 10 mM Sodium Chloride
-0.3
+0.3
-0.8
+0.4
+0.2
carbon source dark aerobic
PM with butyrate aerobic in dark
+0.0
-0.2
-0.1
-0.3
+0.4
carbon source
Citraconic (C); anaerobic
+0.1
+0.2
-0.5
-0.0
+0.2
survival
starvation expt 2; 7 days; outgrowth in CAAc
+0.1
+0.1
-0.5
+0.2
+0.1
stress
L-Lactate (C) with 10 mM Sodium Chloride
+0.2
+0.2
-0.4
+0.3
-0.3
stress
L-Lactate (C) with 10 mM Sodium Chloride
+0.1
+0.3
-0.8
+0.5
+0.0
carbon source
acetate trihydrate and Sodium L-Lactate (C)
-0.4
-0.1
+1.0
+0.2
-0.6
carbon source
MDC_bicarb with butyrate and Adenine
-0.1
+0.2
+0.6
+0.1
-0.2
sulfur source
NFM with pyruvate
-0.1
+0.3
+0.8
-0.1
-0.2
carbon source
PM with succinate anaerobic with light
+0.1
+0.3
-0.1
+0.2
+0.4
carbon source
acetate trihydrate and Sodium L-Lactate (C)
-0.3
-0.3
+1.1
+0.2
+0.1
carbon source
PM with argon and bicarbonate 20 mM and Sodium thiosulfate 50 mM
+0.1
-0.2
+0.7
-0.0
+0.3
carbon source
PM with succinate and Sodium Formate anaerobic with light
+0.1
-0.0
+0.7
-0.1
+0.2
carbon source
L-Leucine (C); anaerobic
+0.1
-0.1
+0.6
-0.0
+0.3
carbon source dark aerobic
PM with succinate aerobic in dark
+0.2
-0.0
+0.7
+0.2
-0.1
stress
PM_argon75_N2O25 butyrate and Chloride 0.1 mM
+0.0
+0.0
+0.8
+0.1
-0.1
carbon source dark aerobic
PM with succinate aerobic in dark
+0.1
-0.1
+0.6
+0.2
+0.1
carbon source dark aerobic
PM with succinate aerobic in dark
+0.1
+0.1
+0.7
+0.0
+0.1
sulfur source
NFM with pyruvate
-0.1
+0.0
+0.9
+0.3
-0.2
carbon source dark aerobic
PM with succinate aerobic in dark
+0.1
+0.0
+0.8
-0.0
+0.2
carbon source
aspen wood chips that have been decomposed by a fungus (C)
+0.1
+0.1
+0.8
+0.1
+0.1
carbon source
PM with argon and bicarbonate 20 mM and Sodium thiosulfate 50 mM
+0.2
+0.1
+1.0
-0.0
+0.0
carbon source
acetate trihydrate and Sodium L-Lactate (C)
-0.2
+0.0
+1.1
+0.3
+0.2
carbon source dark aerobic
PM with succinate and Sodium Formate aerobic in dark
+0.1
+0.3
+1.2
+0.2
+0.1
carbon source dark aerobic
PM with succinate and Sodium Formate aerobic in dark
+0.1
-0.0
+1.3
+0.4
+0.2
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