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Protein
Homologs
Fitness for 5 genes in
Rhodopseudomonas palustris CGA009
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
TX73_008730 and TX73_008735 are separated by 202 nucleotides
TX73_008735 and TX73_008740 are separated by 117 nucleotides
TX73_008740 and TX73_008745 are separated by 145 nucleotides
TX73_008745 and TX73_008750 are separated by 134 nucleotides
TX73_008730: TX73_008730 - pyridoxamine 5'-phosphate oxidase family protein, at 1,892,428 to 1,893,063
_008730
TX73_008735: TX73_008735 - CinA family protein, at 1,893,266 to 1,893,754
_008735
TX73_008740: TX73_008740 - sulfite exporter TauE/SafE family protein, at 1,893,872 to 1,894,615
_008740
TX73_008745: TX73_008745 - acyl-CoA dehydrogenase family protein, at 1,894,761 to 1,896,548
_008745
TX73_008750: TX73_008750 - amidase, at 1,896,683 to 1,898,155
_008750
Group
Condition
TX73
_008730
TX73
_008735
TX73
_008740
TX73
_008745
TX73
_008750
carbon source
acetate trihydrate and Sodium L-Lactate (C)
-0.1
-0.1
-0.2
-0.2
-0.4
carbon source
acetate trihydrate and Sodium L-Lactate (C)
-0.0
-0.2
-0.2
-0.2
-0.2
stress
L-Lactate (C) with 10 mM Sodium Chloride
-0.3
+0.3
-0.6
-0.0
-0.1
carbon source
PM with argon and butyrate 10 mM and Sodium bicarbonate 10 mM
-0.1
-0.2
-0.3
-0.1
+0.1
carbon source
acetate trihydrate and Sodium L-Lactate (C)
-0.3
+0.2
+0.1
-0.3
-0.2
carbon source
MDC_bicarb with butyrate and Adenine
-0.2
-0.2
+0.1
-0.1
-0.1
carbon source
Butyric Acid (C); anaerobic
+0.2
-0.2
-0.0
-0.3
-0.1
sulfur source
Taurine sulfur source
+0.1
-0.4
-0.1
+0.2
-0.1
sulfur source
NFM_No_Mo_Plus_VCl3 with acetate trihydrate
-0.2
+0.1
+0.2
-0.3
+0.1
carbon source
MDC_bicarb with butyrate
+0.2
-0.4
+0.1
-0.1
+0.2
carbon source
Pimelic (C); anaerobic
+0.1
+0.1
-0.2
-0.2
+0.1
stress
L-Lactate (C) with 10 mM Sodium Chloride
+0.1
+0.3
-0.3
+0.0
-0.2
carbon source
Fumarate (C); anaerobic
+0.2
+0.1
+0.1
-0.2
-0.1
sulfur source
NFM with pyruvate
-0.1
-0.1
-0.2
+0.5
-0.0
sulfur source
sodium isethionate sulfur source
+0.0
-0.2
+0.2
+0.2
-0.1
survival
starvation expt 1; 7 days; outgrowth in CAAc
+0.2
+0.1
+0.3
-0.2
-0.0
carbon source dark aerobic
PM with succinate and Sodium Formate aerobic in dark
+0.2
-0.1
-0.0
+0.4
-0.0
sulfur source
Sulfoacetic sulfur source
+0.3
+0.0
-0.2
+0.2
+0.0
sulfur source control
Dimethyl sulfide sulfur source
+0.1
+0.2
+0.1
-0.2
+0.2
carbon source dark aerobic
PM with succinate aerobic in dark
+0.3
-0.1
+0.1
+0.1
+0.0
carbon source
PM with argon and bicarbonate 60 mM and Sodium thiosulfate 30 mM
+0.3
+0.1
+0.2
-0.1
-0.1
sulfur source
NFM with succinate
+0.0
-0.2
+0.2
+0.3
+0.1
sulfur source control
sulfur source control
+0.2
+0.3
-0.1
+0.0
+0.1
carbon source
PM with succinate anaerobic with light
+0.2
-0.1
+0.2
+0.2
+0.1
sulfur source
NFM_No_Mo_Plus_VCl3 with acetate trihydrate
-0.0
+0.2
+0.3
+0.1
+0.0
sulfur source
NFM with pyruvate
+0.7
+0.4
-0.4
-0.3
+0.2
carbon source dark aerobic
PM with butyrate aerobic in dark
+0.3
+0.0
+0.2
+0.3
-0.1
sulfur source
NFM_No_Mo with acetate trihydrate
+0.1
+0.2
+0.2
+0.1
-0.1
carbon source
MDC_bicarb with butyrate and Adenine
-0.1
+0.3
+0.2
+0.0
+0.3
carbon source dark aerobic
PM with butyrate aerobic in dark
+0.3
+0.0
+0.3
+0.1
+0.1
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