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Protein
Homologs
Fitness for 5 genes in
Rhodopseudomonas palustris CGA009
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
TX73_008685 and TX73_008690 are separated by 71 nucleotides
TX73_008690 and TX73_008695 overlap by 4 nucleotides
TX73_008695 and TX73_008700 are separated by 131 nucleotides
TX73_008700 and TX73_008705 are separated by 274 nucleotides
TX73_008685: TX73_008685 - hypothetical protein, at 1,884,939 to 1,885,073
_008685
TX73_008690: TX73_008690 - DUF3095 domain-containing protein, at 1,885,145 to 1,886,308
_008690
TX73_008695: TX73_008695 - DUF2147 domain-containing protein, at 1,886,305 to 1,886,745
_008695
TX73_008700: TX73_008700 - MATE family efflux transporter, at 1,886,877 to 1,888,250
_008700
TX73_008705: TX73_008705 - MFS transporter, at 1,888,525 to 1,889,760
_008705
Group
Condition
TX73
_008685
TX73
_008690
TX73
_008695
TX73
_008700
TX73
_008705
carbon source
4-Hydroxybenzoate (C)
-0.5
-0.0
-0.2
-0.1
-0.0
carbon source
Butyric Acid (C); anaerobic
-0.6
-0.0
+0.0
-0.1
+0.1
carbon source dark aerobic
PM with succinate aerobic in dark
-0.7
-0.1
+0.1
-0.0
+0.1
sulfur source
NFM_No_Mo_Plus_VCl3 with acetate trihydrate
-0.4
-0.2
+0.2
-0.2
+0.0
carbon source
aspen wood chips that have been decomposed by a fungus (C)
+0.4
-0.1
-0.4
-0.2
-0.0
survival
starvation expt 1; 3 days; outgrowth in CAAc
-0.4
-0.1
+0.2
-0.1
+0.1
survival outgrowth control
starvation outgrowth control in CAAc
-0.4
-0.1
+0.2
-0.1
+0.2
carbon source
acetate trihydrate and Sodium L-Lactate (C)
-0.7
-0.0
+0.3
-0.1
+0.2
carbon source dark aerobic
PM with succinate aerobic in dark
-0.5
+0.0
+0.3
-0.0
+0.1
carbon source dark aerobic
PM with succinate aerobic in dark
-0.5
+0.1
+0.4
+0.0
+0.0
stress
L-Lactate (C) with 10 mM Sodium Chloride
-0.8
+0.0
+0.9
-0.0
+0.1
stress
PM_N2O butyrate and nitrate 0.1 mM
-0.4
+0.1
+0.4
-0.0
+0.1
carbon source
PM with Formate and Sodium bicarbonate anaerobic with light
-0.3
+0.0
+0.3
+0.1
+0.0
stress
L-Lactate (C) with 10 mM Sodium Chloride
-0.1
+0.1
+0.5
-0.4
+0.1
carbon source dark aerobic
PM with succinate and Sodium Formate aerobic in dark
-0.3
-0.1
+0.6
+0.2
-0.0
carbon source
Azelaic (C); anaerobic
-0.3
+0.0
+0.4
-0.1
+0.2
carbon source
acetate trihydrate and Sodium L-Lactate (C)
-0.4
+0.3
+0.4
+0.1
-0.0
sulfur source control
Dimethyl sulfide sulfur source
-0.3
-0.0
+0.6
+0.0
+0.0
sulfur source
NFM with succinate
+0.1
+0.0
+0.5
-0.3
-0.0
carbon source
PM with argon and bicarbonate 20 mM and Sodium thiosulfate 50 mM
-0.2
-0.0
+0.4
+0.2
+0.1
sulfur source
Thiamine HCl sulfur source
+0.3
-0.1
+0.2
+0.0
-0.2
carbon source
MDC_bicarb with butyrate
-0.2
-0.1
+0.7
+0.1
+0.0
sulfur source
NFM_No_Mo with acetate trihydrate
+0.5
-0.0
+0.2
-0.1
+0.0
carbon source dark aerobic
PM with succinate and Sodium Formate aerobic in dark
-0.1
-0.0
+0.7
-0.1
+0.0
sulfur source control
Dimethyl sulfide sulfur source
+0.2
-0.1
+0.6
-0.0
-0.0
stress
L-Lactate (C) with 10 mM Sodium Chloride
-0.4
-0.1
+1.1
+0.1
+0.1
sulfur source
Dimethylsulfoniopropionate sulfur source
+0.2
+0.0
+0.7
-0.1
+0.0
sulfur source
ethyl methyl sulfide sulfur source
+0.3
+0.1
+0.3
+0.1
+0.1
sulfur source control
Dimethyl sulfide sulfur source
+0.2
-0.0
+0.6
+0.1
+0.1
sulfur source
NFM with pyruvate
+0.2
-0.2
+0.8
+0.0
+0.1
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