Fitness for 5 genes in Rhodopseudomonas palustris CGA009

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500 ntTX73_008660 and TX73_008665 are separated by 152 nucleotidesTX73_008665 and TX73_008670 are separated by 70 nucleotidesTX73_008670 and TX73_008675 are separated by 290 nucleotidesTX73_008675 and TX73_008680 are separated by 218 nucleotides TX73_008660: TX73_008660 - autotransporter-associated beta strand repeat-containing protein, at 1,876,455 to 1,880,450 _008660 TX73_008665: TX73_008665 - choline dehydrogenase, at 1,880,603 to 1,882,207 _008665 TX73_008670: TX73_008670 - coniferyl aldehyde dehydrogenase, at 1,882,278 to 1,883,711 _008670 TX73_008675: TX73_008675 - tRNA-Met, at 1,884,002 to 1,884,078 _008675 TX73_008680: TX73_008680 - GNAT family N-acetyltransferase, at 1,884,297 to 1,884,818 _008680
Group Condition TX73_008660 TX73_008665 TX73_008670 TX73_008675 TX73_008680
carbon source dark aerobic PM with butyrate aerobic in dark -0.2 -0.2 -0.0 N.D. -0.1
sulfur source control sulfur source control -0.0 -0.1 +0.0 N.D. -0.3
carbon source PM with argon and bicarbonate 20 mM and Sodium thiosulfate 50 mM -0.1 -0.1 +0.0 N.D. -0.2
sulfur source control sulfur source control -0.1 +0.0 -0.2 N.D. -0.1
carbon source acetate trihydrate and Sodium L-Lactate (C) +0.1 -0.3 -0.1 N.D. -0.1
carbon source MDC_bicarb with butyrate and Adenine +0.0 -0.0 -0.2 N.D. -0.2
carbon source dark aerobic PM with succinate aerobic in dark -0.2 -0.1 -0.1 N.D. +0.0
carbon source 4-Hydroxybenzoate (C) +0.1 -0.1 -0.2 N.D. -0.1
carbon source dark aerobic PM with succinate aerobic in dark -0.2 +0.2 -0.1 N.D. -0.1
stress L-Lactate (C) with 10 mM Sodium Chloride -0.1 -0.1 +0.1 N.D. -0.1
sulfur source sodium isethionate sulfur source -0.1 +0.0 +0.2 N.D. -0.1
sulfur source NFM with pyruvate -0.0 +0.3 -0.1 N.D. -0.3
stress L-Lactate (C) with 10 mM Sodium Chloride -0.0 +0.2 -0.1 N.D. -0.1
sulfur source NFM_No_Mo_Plus_VCl3 with acetate trihydrate +0.0 +0.2 -0.1 N.D. -0.2
carbon source MDC_bicarb with butyrate -0.1 +0.1 +0.1 N.D. -0.1
survival starvation expt 1; 3 days; outgrowth in CAAc -0.0 -0.1 -0.1 N.D. +0.2
carbon source 4-Aminobutyric (C); anaerobic +0.0 -0.1 -0.1 N.D. +0.2
carbon source PM with argon and bicarbonate 60 mM and Sodium thiosulfate 30 mM -0.0 +0.2 -0.2 N.D. -0.0
carbon source aspen wood chips that have been decomposed by a fungus (C) -0.1 +0.1 +0.1 N.D. -0.1
carbon source L-Leucine (C); anaerobic +0.0 -0.2 +0.1 N.D. +0.1
survival starvation expt 4; 14 days; outgrowth in CAAc +0.0 -0.1 -0.0 N.D. +0.2
sulfur source NFM_No_Mo with acetate trihydrate +0.1 +0.2 +0.1 N.D. -0.2
stress PM_argon75_N2O25 with buyrate and 0.1 mM Chloride; in dark +0.1 -0.1 +0.1 N.D. +0.1
stress L-Lactate (C) with 10 mM Sodium Chloride -0.1 -0.1 +0.1 N.D. +0.3
carbon source Citraconic (C); anaerobic +0.1 -0.1 +0.2 N.D. +0.1
carbon source Pimelic (C); anaerobic +0.1 +0.1 -0.0 N.D. +0.2
stress PM_N2O with buyrate and 0.1 mM bicarb and 0.1 mM nitrate; in dark +0.0 +0.1 +0.2 N.D. +0.1
carbon source L-Malic (C); anaerobic +0.1 +0.0 +0.1 N.D. +0.2
stress PM_argon75_N2O25 butyrate and Chloride 0.1 mM +0.0 +0.2 +0.1 N.D. +0.1
carbon source Fumarate (C); anaerobic +0.0 +0.2 +0.0 N.D. +0.2
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