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Protein
Homologs
Fitness for 5 genes in
Rhodopseudomonas palustris CGA009
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
TX73_008630 and TX73_008635 are separated by 228 nucleotides
TX73_008635 and TX73_008640 are separated by 30 nucleotides
TX73_008640 and TX73_008645 are separated by 422 nucleotides
TX73_008645 and TX73_008650 are separated by 50 nucleotides
TX73_008630: TX73_008630 - PilZ domain-containing protein, at 1,868,699 to 1,869,013
_008630
TX73_008635: TX73_008635 - EAL domain-containing response regulator, at 1,869,242 to 1,870,492
_008635
TX73_008640: TX73_008640 - ATP-binding protein, at 1,870,523 to 1,873,114
_008640
TX73_008645: TX73_008645 - response regulator, at 1,873,537 to 1,874,163
_008645
TX73_008650: TX73_008650 - SDR family oxidoreductase, at 1,874,214 to 1,874,996
_008650
Group
Condition
TX73
_008630
TX73
_008635
TX73
_008640
TX73
_008645
TX73
_008650
stress
PM_N2O butyrate and nitrate 0.1 mM
-0.1
-0.1
+0.1
-1.3
+0.1
carbon source
PM with argon and bicarbonate 20 mM and Sodium thiosulfate 50 mM
-0.4
-0.1
+0.1
-0.8
+0.1
stress
PM_N2O butyrate and nitrate 0.1 mM
+0.2
-0.1
+0.0
-1.1
+0.0
carbon source
PM with argon and bicarbonate 20 mM and Sodium thiosulfate 50 mM
-0.2
+0.0
-0.0
-0.8
+0.1
carbon source
MDC_bicarb with butyrate and Adenine
-0.3
-0.1
-0.2
-0.5
+0.2
stress
PM_N2O butyrate and nitrate 0.1 mM
+0.3
+0.1
+0.3
-1.5
+0.1
carbon source
PM with argon and bicarbonate 20 mM and Sodium thiosulfate 50 mM
+0.1
-0.1
-0.1
-0.9
+0.2
stress
PM_N2O butyrate and nitrate 0.1 mM
+0.2
-0.1
+0.1
-1.1
+0.2
stress
L-Lactate (C) with 10 mM Sodium Chloride
+0.1
+0.4
+0.1
-1.0
-0.3
stress
Benzoate (C), sodium fluoride stress
+0.2
-0.1
+0.0
-0.7
-0.1
sulfur source
Sulfoacetic sulfur source
-0.6
-0.3
+0.2
+0.2
-0.0
sulfur source
NFM with pyruvate
+0.1
+0.2
-0.0
-0.8
+0.2
stress
L-Lactate (C) with 10 mM Sodium Chloride
+0.4
+0.1
+0.2
-0.6
-0.4
carbon source dark aerobic
PM with butyrate aerobic in dark
-0.5
-0.0
-0.1
+0.4
-0.1
stress
PM_argon75_N2O25 butyrate and Chloride 0.1 mM
+0.1
+0.1
+0.2
-0.7
+0.1
sulfur source
Dimethylsulfoniopropionate sulfur source
-0.2
-0.1
+0.0
+0.6
-0.3
stress
PM_N2O with buyrate and 0.1 mM bicarb and 0.1 mM nitrate; in dark
+0.2
+0.1
+0.1
-0.5
+0.1
sulfur source
sodium isethionate sulfur source
-0.1
-0.0
-0.0
+0.6
-0.4
carbon source
acetate trihydrate and Sodium L-Lactate (C)
-0.0
+0.4
+0.1
-0.0
-0.4
stress
PM_argon75_N2O25 butyrate and Chloride 0.1 mM
+0.6
-0.0
+0.2
-0.6
+0.0
stress
L-Lactate (C) with 10 mM Sodium Chloride
+0.3
+0.3
+0.2
-0.1
-0.5
carbon source
4-Hydroxybenzoate (C)
-0.0
-0.1
-0.1
+0.7
-0.1
stress
PM_argon75_N2O25 butyrate and Chloride 0.1 mM
+0.7
-0.1
+0.2
-0.5
+0.2
carbon source
4-Hydroxybenzoate (C)
-0.4
-0.0
-0.3
+1.2
+0.1
sulfur source
Dimethylsulfoniopropionate sulfur source
-0.1
-0.0
-0.0
+1.0
-0.2
stress
PM_argon75_N2O25 with buyrate and 0.1 mM Chloride; in dark
+0.7
+0.0
+0.0
-0.3
+0.2
sulfur source
NFM with pyruvate
+0.1
+0.6
-0.2
+0.2
-0.0
sulfur source control
Dimethyl sulfide sulfur source
+0.3
+0.0
+0.0
+0.8
-0.2
sulfur source
NFM_No_Mo with acetate trihydrate
+0.4
+0.1
+0.1
+0.5
+0.0
carbon source
acetate trihydrate and Sodium L-Lactate (C)
+0.6
+0.4
+0.1
+0.0
+0.2
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TX73_008640
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