Fitness for 5 genes in Rhodopseudomonas palustris CGA009

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500 ntTX73_008595 and TX73_008600 are separated by 378 nucleotidesTX73_008600 and TX73_008605 are separated by 177 nucleotidesTX73_008605 and TX73_008610 are separated by 646 nucleotidesTX73_008610 and TX73_008615 are separated by 178 nucleotides TX73_008595: TX73_008595 - BON domain-containing protein, at 1,857,411 to 1,858,061 _008595 TX73_008600: TX73_008600 - phosphoketolase family protein, at 1,858,440 to 1,860,791 _008600 TX73_008605: TX73_008605 - response regulator, at 1,860,969 to 1,861,472 _008605 TX73_008610: TX73_008610 - methyl-accepting chemotaxis protein, at 1,862,119 to 1,864,269 _008610 TX73_008615: TX73_008615 - hybrid sensor histidine kinase/response regulator, at 1,864,448 to 1,867,261 _008615
Group Condition TX73_008595 TX73_008600 TX73_008605 TX73_008610 TX73_008615
sulfur source NFM with pyruvate +0.3 +0.2 -1.6 -0.3 -1.4
survival starvation expt 3; 3 days; outgrowth in CAAc -0.3 -0.0 -0.0 -0.1 -0.5
carbon source dark aerobic PM with butyrate aerobic in dark -0.2 -0.1 -0.2 -0.0 -0.2
sulfur source NFM with pyruvate -0.0 +0.1 -0.1 -0.4 -0.3
stress L-Lactate (C) with 10 mM Sodium Chloride +0.2 -0.0 -0.3 -0.2 -0.3
stress L-Lactate (C) with 10 mM Sodium Chloride +0.2 +0.0 -0.2 -0.3 -0.3
carbon source Butyric Acid (C); anaerobic -0.1 -0.0 -0.1 +0.1 -0.4
carbon source 4-Hydroxybenzoate (C) +0.0 +0.1 -0.2 +0.0 -0.3
stress Benzoate (C), sodium fluoride stress -0.3 +0.1 -0.3 +0.2 +0.1
carbon source acetate trihydrate and Sodium L-Lactate (C) +0.4 +0.1 -0.0 -0.2 -0.6
sulfur source control sulfur source control +0.1 +0.0 -0.3 -0.2 +0.1
sulfur source Dimethylsulfoniopropionate sulfur source +0.1 -0.1 -0.5 -0.0 +0.3
carbon source MDC_bicarb with butyrate +0.1 -0.2 +0.3 -0.1 -0.2
stress PM_argon75_N2O25 butyrate and nitrate 0.1 mM -0.1 -0.0 +0.2 +0.1 -0.3
sulfur source NFM with succinate +0.0 -0.3 -0.2 +0.1 +0.2
carbon source aspen wood chips that have been decomposed by a fungus (C) +0.2 +0.0 -0.2 +0.2 -0.2
stress L-Lactate (C) with 10 mM Sodium Chloride +0.1 +0.1 +0.0 -0.5 +0.2
carbon source dark aerobic PM with butyrate aerobic in dark +0.1 -0.1 -0.5 +0.1 +0.4
stress Benzoate (C), sodium fluoride stress -0.1 +0.1 -0.3 +0.0 +0.3
stress PM_N2O butyrate and nitrate 0.1 mM +0.2 -0.1 +0.2 +0.0 -0.3
carbon source dark aerobic PM with succinate and Sodium Formate aerobic in dark -0.0 -0.1 -0.0 -0.2 +0.5
carbon source PM with argon and bicarbonate 60 mM and Sodium thiosulfate 30 mM -0.0 -0.0 -0.3 +0.0 +0.4
carbon source MDC_bicarb with butyrate and Adenine +0.2 -0.3 -0.1 -0.0 +0.4
carbon source dark aerobic PM with butyrate aerobic in dark -0.1 -0.1 -0.1 -0.1 +0.5
carbon source MDC_bicarb with butyrate and Adenine +0.2 -0.0 +0.2 -0.2 +0.2
sulfur source NFM with succinate +0.2 -0.2 -0.1 -0.0 +0.5
sulfur source sodium isethionate sulfur source +0.2 +0.0 -0.3 +0.2 +0.2
carbon source aspen wood chips that have been decomposed by a fungus (C) +0.2 +0.2 +0.2 +0.0 -0.3
carbon source dark aerobic PM with succinate aerobic in dark +0.1 -0.0 +0.1 -0.1 +0.5
carbon source 4-Hydroxybenzoate (C) +0.3 +0.2 +0.3 +0.0 +0.1
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