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Protein
Homologs
Fitness for 5 genes in
Rhodopseudomonas palustris CGA009
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
TX73_008085 and TX73_008090 are separated by 13 nucleotides
TX73_008090 and TX73_008095 are separated by 81 nucleotides
TX73_008095 and TX73_008100 are separated by 208 nucleotides
TX73_008100 and TX73_008105 are separated by 156 nucleotides
TX73_008085: TX73_008085 - YgcG family protein, at 1,750,233 to 1,751,156
_008085
TX73_008090: TX73_008090 - TPM domain-containing protein, at 1,751,170 to 1,751,667
_008090
TX73_008095: TX73_008095 - glutathione S-transferase, at 1,751,749 to 1,752,360
_008095
TX73_008100: TX73_008100 - hypothetical protein, at 1,752,569 to 1,753,540
_008100
TX73_008105: TX73_008105 - ferredoxin--NADP reductase, at 1,753,697 to 1,754,470
_008105
Group
Condition
TX73
_008085
TX73
_008090
TX73
_008095
TX73
_008100
TX73
_008105
carbon source dark aerobic
PM with butyrate aerobic in dark
-0.3
-0.1
-0.3
+0.1
-0.4
sulfur source
sodium isethionate sulfur source
-0.6
-0.2
+0.1
+0.1
-0.4
carbon source
PM with succinate anaerobic with light
-0.3
-0.2
-0.4
-0.0
+0.0
sulfur source control
sulfur source control
-0.4
-0.4
-0.2
-0.1
+0.1
carbon source dark aerobic
PM with succinate aerobic in dark
-0.3
+0.0
-0.3
-0.1
-0.1
carbon source dark aerobic
PM with butyrate aerobic in dark
-0.3
-0.1
+0.0
-0.0
-0.4
carbon source
MDC_bicarb with butyrate and Adenine
-0.1
-0.0
-0.3
-0.2
-0.2
carbon source dark aerobic
PM with succinate aerobic in dark
-0.2
-0.2
-0.1
+0.1
-0.3
stress
PM_argon75_N2O25 butyrate and Chloride 0.1 mM
-0.2
-0.2
-0.1
+0.2
-0.3
carbon source
PM with argon and bicarbonate 60 mM and Sodium thiosulfate 30 mM
-0.4
+0.0
-0.3
-0.2
+0.2
carbon source
PM with argon and butyrate 10 mM and Sodium bicarbonate 10 mM
-0.4
-0.1
-0.2
+0.1
+0.1
carbon source
MDC_bicarb with butyrate
-0.0
+0.1
-0.4
-0.1
-0.1
sulfur source
Thiamine HCl sulfur source
-0.5
-0.1
+0.3
+0.1
-0.1
carbon source
Citraconic (C); anaerobic
-0.4
+0.0
-0.1
+0.1
+0.1
carbon source
Fumarate (C); anaerobic
-0.4
+0.1
+0.2
-0.0
-0.1
stress
L-Lactate (C) with 10 mM Sodium Chloride
-0.3
-0.2
-0.4
+0.4
+0.1
sulfur source
NFM with pyruvate
+0.2
-0.2
-0.5
+0.5
-0.1
carbon source
acetate trihydrate and Sodium L-Lactate (C)
-0.2
-0.3
+0.0
+0.4
+0.0
stress
PM_argon75_N2O25 butyrate and Chloride 0.1 mM
+0.1
-0.2
+0.3
+0.0
-0.2
sulfur source control
Dimethyl sulfide sulfur source
+0.1
+0.2
-0.4
-0.0
+0.2
sulfur source
NFM with pyruvate
-0.2
-0.5
+0.3
+0.4
+0.2
carbon source
Pimelic (C); anaerobic
+0.2
+0.3
-0.2
-0.1
-0.0
survival
starvation expt 3; 7 days; outgrowth in CAAc
+0.2
+0.1
-0.1
-0.1
+0.3
carbon source
4-Hydroxybenzoate (C)
+0.2
-0.2
+0.2
+0.0
+0.2
carbon source
Butyric Acid (C); anaerobic
+0.2
+0.2
-0.1
+0.1
+0.2
carbon source
acetate trihydrate and Sodium L-Lactate (C)
-0.4
-0.1
+0.2
+0.5
+0.4
stress
L-Lactate (C) with 10 mM Sodium Chloride
-0.1
+0.1
+0.2
+0.3
+0.3
survival
starvation expt 2; 7 days; outgrowth in CAAc
+0.2
+0.1
+0.2
+0.0
+0.2
carbon source
acetate trihydrate and Sodium L-Lactate (C)
-0.0
+0.2
+0.0
+0.3
+0.4
stress
L-Lactate (C) with 10 mM Sodium Chloride
-0.1
-0.2
+0.1
+0.4
+0.6
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