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Protein
Homologs
Fitness for 5 genes in
Rhodopseudomonas palustris CGA009
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
TX73_007400 and TX73_007405 are separated by 9 nucleotides
TX73_007405 and TX73_007410 are separated by 292 nucleotides
TX73_007410 and TX73_007415 are separated by 188 nucleotides
TX73_007415 and TX73_007420 are separated by 46 nucleotides
TX73_007400: TX73_007400 - molybdenum storage protein subunit alpha, at 1,597,784 to 1,598,605
_007400
TX73_007405: TX73_007405 - uridine kinase, at 1,598,615 to 1,599,427
_007405
TX73_007410: TX73_007410 - GntR family transcriptional regulator, at 1,599,720 to 1,600,535
_007410
TX73_007415: TX73_007415 - hypothetical protein, at 1,600,724 to 1,600,864
_007415
TX73_007420: TX73_007420 - ABC transporter ATP-binding protein, at 1,600,911 to 1,601,912
_007420
Group
Condition
TX73
_007400
TX73
_007405
TX73
_007410
TX73
_007415
TX73
_007420
carbon source
Citraconic (C); anaerobic
+0.1
-0.1
-1.0
-1.5
-0.2
carbon source
acetate trihydrate and Sodium L-Lactate (C)
-0.0
-0.0
+0.3
-3.1
+0.2
carbon source
Citraconic (C); anaerobic
-0.1
-0.0
-1.2
-0.6
-0.3
carbon source dark aerobic
PM with succinate and Sodium Formate aerobic in dark
-0.3
-0.2
-0.6
-0.7
-0.1
sulfur source
NFM with pyruvate
-0.3
-0.3
-0.2
-0.8
-0.3
carbon source
Citraconic (C); anaerobic
+0.2
+0.0
-1.1
-0.7
-0.1
carbon source dark aerobic
PM with succinate and Sodium Formate aerobic in dark
-0.2
-0.1
-0.7
-0.5
+0.0
carbon source
PM with argon and bicarbonate 60 mM and Sodium thiosulfate 30 mM
-0.2
+0.2
+0.1
-1.5
-0.1
sulfur source control
sulfur source control
-0.1
-0.0
+0.2
-1.6
+0.2
carbon source
PM with Formate and Sodium bicarbonate anaerobic with light
-0.1
+0.1
-0.6
-0.9
-0.0
carbon source
PM with Formate and Sodium bicarbonate anaerobic with light
+0.0
+0.0
-0.7
-0.7
+0.0
carbon source dark aerobic
PM with succinate aerobic in dark
-0.1
+0.1
-0.1
-1.3
+0.1
carbon source
PM with Formate and Sodium bicarbonate anaerobic with light
-0.1
+0.2
-0.3
-1.0
+0.1
sulfur source control
Dimethyl sulfide sulfur source
+0.1
+0.1
-0.2
-1.0
-0.1
sulfur source
Taurine sulfur source
+0.1
+0.0
+0.0
-1.3
+0.1
carbon source
acetate trihydrate and Sodium L-Lactate (C)
-0.1
+0.1
-0.2
-1.1
+0.2
sulfur source
Sulfoacetic sulfur source
-0.2
-0.2
+0.1
-0.9
+0.2
sulfur source
NFM_No_Mo with acetate trihydrate
-0.1
+0.1
+0.2
-1.1
-0.1
sulfur source control
sulfur source control
-0.0
+0.1
+0.1
-1.4
+0.2
carbon source
Pimelic (C); anaerobic
+0.2
+0.2
-0.1
-1.1
-0.1
carbon source
PM with argon and bicarbonate 60 mM and Sodium thiosulfate 30 mM
-0.2
+0.3
+0.0
-0.9
-0.0
stress
L-Lactate (C) with 10 mM Sodium Chloride
-0.1
+0.1
+0.2
-1.4
+0.3
sulfur source
Thiamine HCl sulfur source
+0.1
+0.2
-0.2
-1.0
+0.0
carbon source
Pimelic (C); anaerobic
+0.2
+0.2
+0.1
-1.1
-0.1
sulfur source
Dimethylsulfoniopropionate sulfur source
+0.1
+0.3
+0.1
-0.9
-0.4
survival
starvation expt 2; 14 days; outgrowth in CAAc
+0.2
+0.2
+0.1
-1.0
-0.0
sulfur source
NFM_No_Mo with acetate trihydrate
-0.2
-0.2
+0.3
-0.3
+0.5
stress
PM_argon75_N2O25 butyrate and Chloride 0.1 mM
-0.1
-0.3
+0.3
+0.6
+0.2
carbon source
4-Hydroxybenzoate (C)
-0.4
+0.1
+0.0
+1.1
-0.1
carbon source
aspen wood chips that have been decomposed by a fungus (C)
-0.2
+0.3
+0.4
+0.7
-0.2
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