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Protein
Homologs
Fitness for 5 genes in
Rhodopseudomonas palustris CGA009
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
TX73_007195 and TX73_007200 are separated by 3 nucleotides
TX73_007200 and TX73_007205 are separated by 263 nucleotides
TX73_007205 and TX73_007210 overlap by 1 nucleotides
TX73_007210 and TX73_007215 are separated by 2 nucleotides
TX73_007195: TX73_007195 - amidase family protein, at 1,549,122 to 1,550,576
_007195
TX73_007200: TX73_007200 - type 1 glutamine amidotransferase, at 1,550,580 to 1,551,407
_007200
TX73_007205: TX73_007205 - allophanate hydrolase, at 1,551,671 to 1,553,494
_007205
TX73_007210: TX73_007210 - urea carboxylase, at 1,553,494 to 1,557,042
_007210
TX73_007215: TX73_007215 - urea carboxylase-associated family protein, at 1,557,045 to 1,557,680
_007215
Group
Condition
TX73
_007195
TX73
_007200
TX73
_007205
TX73
_007210
TX73
_007215
carbon source
acetate trihydrate and Sodium L-Lactate (C)
-0.9
+0.3
-0.2
-0.1
-0.0
stress
L-Lactate (C) with 10 mM Sodium Chloride
-0.2
-0.1
-0.3
-0.1
+0.1
stress
L-Lactate (C) with 10 mM Sodium Chloride
-0.1
-0.1
-0.5
-0.3
+0.3
sulfur source
NFM with pyruvate
-0.0
-0.8
-0.1
+0.0
+0.3
carbon source
PM with argon and bicarbonate 60 mM and Sodium thiosulfate 30 mM
+0.2
-0.4
-0.0
+0.0
-0.3
carbon source
acetate trihydrate and Sodium L-Lactate (C)
-0.5
-0.3
-0.2
-0.1
+0.5
carbon source
Citraconic (C); anaerobic
-0.2
+0.2
-0.1
+0.0
-0.5
carbon source
PM with argon and bicarbonate 60 mM and Sodium thiosulfate 30 mM
+0.2
-0.4
-0.0
+0.0
-0.3
carbon source
4-Aminobutyric (C); anaerobic
-0.3
+0.2
+0.1
-0.1
-0.3
carbon source
4-Aminobutyric (C); anaerobic
-0.4
+0.3
-0.0
-0.1
-0.3
carbon source
Azelaic (C); anaerobic
-0.2
+0.1
+0.2
+0.0
-0.4
carbon source
Sebacic (C); anaerobic
-0.3
+0.2
-0.1
+0.1
-0.3
carbon source
4-Aminobutyric (C); anaerobic
-0.5
+0.1
+0.1
+0.0
-0.1
carbon source
acetate trihydrate and Sodium L-Lactate (C)
-0.5
+0.1
-0.1
-0.0
+0.2
sulfur source
NFM with pyruvate
+0.2
-0.4
-0.2
+0.2
-0.0
carbon source
aspen wood chips that have been decomposed by a fungus (C)
+0.0
+0.3
-0.1
+0.1
-0.5
carbon source
acetate trihydrate (C)
+0.2
-0.2
-0.2
-0.0
+0.4
carbon source
MDC_bicarb with butyrate and Adenine
-0.4
+0.2
-0.1
+0.2
+0.3
carbon source dark aerobic
PM with succinate aerobic in dark
-0.1
-0.4
+0.2
+0.2
+0.3
stress
L-Lactate (C) with 10 mM Sodium Chloride
-0.4
-0.0
+0.2
+0.0
+0.6
carbon source
PM with argon and butyrate 10 mM and Sodium bicarbonate 10 mM
+0.1
-0.2
+0.2
+0.1
+0.2
carbon source
PM with succinate anaerobic with light
-0.1
-0.2
+0.1
+0.2
+0.6
carbon source
PM with argon and bicarbonate 20 mM and Sodium thiosulfate 50 mM
+0.1
-0.3
+0.1
+0.2
+0.4
carbon source dark aerobic
PM with butyrate aerobic in dark
-0.2
+0.1
-0.0
+0.3
+0.4
carbon source
aspen wood chips that have been decomposed by a fungus (C)
+0.2
-0.1
+0.3
+0.2
+0.1
stress
Benzoate (C), sodium fluoride stress
+0.2
+0.4
+0.1
-0.1
+0.3
stress
PM_argon75_N2O25 with buyrate and 0.1 mM Chloride; in dark
+0.1
+0.3
+0.0
+0.3
+0.1
sulfur source
Taurine sulfur source
+0.1
+0.3
+0.2
+0.1
+0.2
sulfur source
2-(Methylthio)ethanol sulfur source
+0.1
+0.3
+0.2
+0.1
+0.2
sulfur source
sodium isethionate sulfur source
+0.1
+0.1
+0.3
+0.2
+0.4
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