Fitness for 5 genes in Rhodopseudomonas palustris CGA009

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500 ntTX73_006780 and TX73_006785 are separated by 364 nucleotidesTX73_006785 and TX73_006790 are separated by 272 nucleotidesTX73_006790 and TX73_006795 are separated by 13 nucleotidesTX73_006795 and TX73_006800 are separated by 44 nucleotides TX73_006780: TX73_006780 - sensor histidine kinase, at 1,440,218 to 1,440,916 _006780 TX73_006785: TX73_006785 - DUF3551 domain-containing protein, at 1,441,281 to 1,441,511 _006785 TX73_006790: TX73_006790 - FUSC family protein, at 1,441,784 to 1,443,835 _006790 TX73_006795: TX73_006795 - DUF1656 domain-containing protein, at 1,443,849 to 1,444,055 _006795 TX73_006800: TX73_006800 - HlyD family secretion protein, at 1,444,100 to 1,444,993 _006800
Group Condition TX73_006780 TX73_006785 TX73_006790 TX73_006795 TX73_006800
carbon source MDC_bicarb with butyrate and Adenine -0.5 -1.2 -0.1 N.D. -0.5
carbon source Fumarate (C); anaerobic -0.2 -1.0 -0.1 N.D. +0.1
stress PM_argon75_N2O25 with buyrate and 0.1 mM Chloride; in dark -0.2 -0.9 -0.1 N.D. +0.0
carbon source Butyric Acid (C); anaerobic -0.4 -0.8 -0.1 N.D. +0.2
carbon source PM with argon and bicarbonate 20 mM and Sodium thiosulfate 50 mM -0.3 -0.8 +0.0 N.D. -0.1
carbon source Azelaic (C); anaerobic -0.4 -0.6 -0.0 N.D. -0.0
sulfur source NFM with pyruvate -0.1 -0.3 -0.4 N.D. -0.1
carbon source PM with argon and bicarbonate 20 mM and Sodium thiosulfate 50 mM -0.3 -0.6 +0.0 N.D. -0.0
survival starvation expt 4; 7 days; outgrowth in CAAc -0.2 -0.5 -0.2 N.D. +0.1
carbon source Pimelic (C); anaerobic -0.0 -0.9 -0.0 N.D. +0.0
carbon source Citraconic (C); anaerobic -0.3 -0.6 -0.2 N.D. +0.2
carbon source acetate trihydrate and Sodium L-Lactate (C) +0.2 -0.8 -0.0 N.D. -0.1
carbon source Sebacic (C); anaerobic -0.3 -0.6 -0.0 N.D. +0.2
carbon source 4-Hydroxybenzoate (C) +0.3 -1.0 +0.1 N.D. +0.1
carbon source Pimelic (C); anaerobic -0.4 -0.4 -0.0 N.D. +0.2
sulfur source control Dimethyl sulfide sulfur source -0.3 +0.4 -0.1 N.D. -0.2
sulfur source NFM_No_Mo with acetate trihydrate +0.3 -0.3 +0.2 N.D. -0.3
carbon source PM with Formate and Sodium bicarbonate anaerobic with light +0.4 -0.5 +0.1 N.D. -0.1
stress PM_N2O with buyrate and 0.1 mM bicarb and 0.1 mM nitrate; in dark +0.4 -0.6 +0.1 N.D. +0.1
stress Benzoate (C), sodium fluoride stress +0.2 -0.4 +0.1 N.D. +0.3
stress Benzoate (C), sodium fluoride stress +0.2 -0.3 +0.3 N.D. +0.2
sulfur source NFM with pyruvate +0.8 -0.1 -0.5 N.D. +0.3
stress PM_argon75_N2O25 butyrate and Chloride 0.1 mM +0.1 +0.7 +0.3 N.D. -0.2
carbon source acetate trihydrate and Sodium L-Lactate (C) +0.9 +0.4 -0.1 N.D. -0.2
carbon source 4-Hydroxybenzoate (C) +0.4 +0.3 +0.0 N.D. +0.2
stress PM_argon75_N2O25 butyrate and Chloride 0.1 mM +0.5 +0.5 -0.0 N.D. -0.1
stress L-Lactate (C) with 10 mM Sodium Chloride +0.4 +0.7 +0.2 N.D. -0.2
carbon source dark aerobic PM with succinate aerobic in dark +0.1 +0.7 +0.3 N.D. +0.1
stress L-Lactate (C) with 10 mM Sodium Chloride +0.7 +0.6 +0.1 N.D. -0.1
carbon source acetate trihydrate and Sodium L-Lactate (C) -0.0 +1.0 +0.4 N.D. +0.2
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