Fitness for 5 genes in Rhodopseudomonas palustris CGA009

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500 ntTX73_006755 and TX73_006760 are separated by 28 nucleotidesTX73_006760 and TX73_006765 overlap by 4 nucleotidesTX73_006765 and TX73_006770 are separated by 107 nucleotidesTX73_006770 and TX73_006775 are separated by 420 nucleotides TX73_006755: TX73_006755 - alpha/beta hydrolase, at 1,436,684 to 1,436,929 _006755 TX73_006760: TX73_006760 - cytochrome ubiquinol oxidase subunit I, at 1,436,958 to 1,437,560 _006760 TX73_006765: TX73_006765 - cytochrome d ubiquinol oxidase subunit II, at 1,437,557 to 1,438,582 _006765 TX73_006770: TX73_006770 - UBP-type zinc finger domain-containing protein, at 1,438,690 to 1,438,998 _006770 TX73_006775: TX73_006775 - AraC family transcriptional regulator, at 1,439,419 to 1,440,021 _006775
Group Condition TX73_006755 TX73_006760 TX73_006765 TX73_006770 TX73_006775
stress L-Lactate (C) with 10 mM Sodium Chloride N.D. -0.6 -1.0 -0.6 +0.6
sulfur source sodium isethionate sulfur source N.D. -0.3 -0.1 -0.0 -0.6
carbon source acetate trihydrate and Sodium L-Lactate (C) N.D. -0.4 +0.2 -0.3 -0.5
sulfur source NFM with pyruvate N.D. -1.1 +0.4 -0.5 +0.4
carbon source Butyric Acid (C); anaerobic N.D. +0.1 -0.1 -0.4 -0.4
sulfur source control sulfur source control N.D. -0.1 +0.0 +0.1 -0.9
stress PM_N2O butyrate and nitrate 0.1 mM N.D. +0.1 -0.1 -0.3 -0.4
sulfur source NFM_No_Mo_Plus_VCl3 with acetate trihydrate N.D. +0.1 -0.2 -0.1 -0.6
monoculture OAcsForEtOH (C); monoculture N.D. -0.2 +0.1 -0.2 -0.4
sulfur source Dimethylsulfoniopropionate sulfur source N.D. +0.1 -0.5 -0.1 -0.1
carbon source Fumarate (C); anaerobic N.D. -0.1 -0.2 -0.5 +0.2
sulfur source ethyl methyl sulfide sulfur source N.D. -0.2 -0.1 +0.1 -0.4
carbon source L-Malic (C); anaerobic N.D. -0.2 -0.3 -0.3 +0.3
survival starvation expt 2; 14 days; outgrowth in CAAc N.D. -0.0 -0.4 -0.3 +0.3
sulfur source NFM_No_Mo with acetate trihydrate N.D. -0.3 -0.1 -0.3 +0.5
stress L-Lactate (C) with 10 mM Sodium Chloride N.D. -0.3 +0.3 +0.2 -0.4
carbon source acetate trihydrate and Sodium L-Lactate (C) N.D. -0.6 -0.1 +0.5 +0.1
carbon source acetate trihydrate and Sodium L-Lactate (C) N.D. -0.5 +0.0 +0.1 +0.3
carbon source PM with succinate anaerobic with light N.D. +0.3 +0.2 +0.0 -0.4
carbon source Butyric Acid (C); anaerobic N.D. -0.4 +0.1 -0.2 +0.4
stress L-Lactate (C) with 10 mM Sodium Chloride N.D. -0.4 +0.1 +0.0 +0.4
survival starvation expt 1; 14 days; outgrowth in CAAc N.D. +0.1 -0.2 -0.1 +0.4
carbon source PM with Formate and Sodium bicarbonate anaerobic with light N.D. -0.2 -0.0 -0.1 +0.7
survival starvation expt 3; 7 days; outgrowth in CAAc N.D. +0.3 -0.1 -0.2 +0.4
stress Benzoate (C), sodium fluoride stress N.D. -0.3 +0.1 -0.2 +0.8
sulfur source NFM_No_Mo_Plus_VCl3 with acetate trihydrate N.D. -0.0 +0.2 -0.1 +0.6
carbon source Citraconic (C); anaerobic N.D. +0.2 +0.0 -0.2 +0.6
carbon source dark aerobic PM with succinate aerobic in dark N.D. -0.0 +0.0 +0.2 +0.6
carbon source PM with argon and bicarbonate 60 mM and Sodium thiosulfate 30 mM N.D. +0.2 +0.0 +0.0 +0.7
carbon source MDC_bicarb with butyrate and Adenine N.D. -0.1 +0.5 -0.0 +0.7
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