Fitness for 5 genes in Rhodopseudomonas palustris CGA009

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500 ntTX73_006535 and TX73_006540 are separated by 91 nucleotidesTX73_006540 and TX73_006545 are separated by 282 nucleotidesTX73_006545 and TX73_006550 are separated by 262 nucleotidesTX73_006550 and TX73_006555 are separated by 232 nucleotides TX73_006535: TX73_006535 - AAA family ATPase, at 1,392,795 to 1,393,904 _006535 TX73_006540: TX73_006540 - class I SAM-dependent methyltransferase, at 1,393,996 to 1,394,691 _006540 TX73_006545: TX73_006545 - DNA starvation/stationary phase protection protein, at 1,394,974 to 1,395,501 _006545 TX73_006550: TX73_006550 - hypothetical protein, at 1,395,764 to 1,396,288 _006550 TX73_006555: TX73_006555 - glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit, at 1,396,521 to 1,397,714 _006555
Group Condition TX73_006535 TX73_006540 TX73_006545 TX73_006550 TX73_006555
sulfur source NFM with pyruvate -0.0 -0.2 -0.0 -0.5 N.D.
sulfur source sodium isethionate sulfur source +0.1 -0.1 +0.1 -0.7 N.D.
carbon source dark aerobic PM with succinate aerobic in dark +0.1 +0.2 -0.1 -0.7 N.D.
carbon source PM with Formate and Sodium bicarbonate anaerobic with light +0.0 +0.2 +0.2 -0.6 N.D.
carbon source dark aerobic PM with butyrate aerobic in dark +0.3 -0.1 +0.3 -0.7 N.D.
stress L-Lactate (C) with 10 mM Sodium Chloride -0.1 -0.6 +0.3 +0.3 N.D.
carbon source MDC_bicarb with butyrate and Adenine +0.3 +0.2 +0.1 -0.6 N.D.
carbon source Fumarate (C); anaerobic -0.0 +0.1 -0.3 +0.4 N.D.
carbon source Butyric Acid (C); anaerobic +0.1 +0.1 -0.4 +0.4 N.D.
stress Benzoate (C), sodium fluoride stress -0.1 +0.1 +0.4 -0.2 N.D.
stress PM_argon75_N2O25 butyrate and Chloride 0.1 mM -0.0 -0.3 +0.2 +0.3 N.D.
carbon source PM with succinate anaerobic with light +0.1 +0.4 -0.1 -0.1 N.D.
carbon source MDC_bicarb with butyrate +0.1 +0.2 -0.3 +0.2 N.D.
carbon source Citraconic (C); anaerobic -0.1 +0.3 -0.3 +0.3 N.D.
carbon source Pimelic (C); anaerobic -0.2 +0.1 +0.1 +0.3 N.D.
carbon source PM with argon and bicarbonate 60 mM and Sodium thiosulfate 30 mM +0.2 +0.3 +0.4 -0.5 N.D.
carbon source 4-Aminobutyric (C); anaerobic +0.1 +0.2 -0.3 +0.3 N.D.
survival starvation expt 4; 3 days; outgrowth in CAAc -0.3 +0.1 +0.3 +0.3 N.D.
carbon source acetate trihydrate and Sodium L-Lactate (C) -0.5 -0.2 +0.5 +0.7 N.D.
sulfur source Dimethylsulfoniopropionate sulfur source -0.2 +0.1 +0.3 +0.3 N.D.
carbon source L-Malic (C); anaerobic -0.3 +0.1 +0.1 +0.6 N.D.
sulfur source 2-(Methylthio)ethanol sulfur source -0.0 +0.4 -0.0 +0.3 N.D.
carbon source acetate trihydrate and Sodium L-Lactate (C) +0.2 -0.2 +0.1 +0.7 N.D.
carbon source dark aerobic PM with succinate aerobic in dark +0.2 +0.4 +0.2 -0.0 N.D.
sulfur source NFM with succinate -0.1 +0.3 +0.3 +0.3 N.D.
carbon source 4-Aminobutyric (C); anaerobic -0.0 +0.4 +0.3 +0.1 N.D.
coculture dpurH coculture with Glucose and NaCl and NH4Cl +0.0 +0.2 +0.2 +0.4 N.D.
carbon source 4-Aminobutyric (C); anaerobic +0.1 +0.3 -0.2 +0.6 N.D.
carbon source PM with succinate and Sodium Formate anaerobic with light +0.3 +0.4 +0.1 +0.1 N.D.
sulfur source NFM with pyruvate -0.2 +0.4 +0.1 +0.9 N.D.
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